Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 AC009135.2-201ENST00000624136 1768 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RNF144AP50876 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF144AP50876 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
RNF144AP50876 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 MT-TS1-201ENST00000387416 69 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 SNORA40.3-201ENST00000390964 122 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 MTCYBP36-201ENST00000404146 440 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 AC068533.2-201ENST00000411872 306 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 NENFP1-201ENST00000419476 466 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 AL512649.1-201ENST00000428997 581 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF144AP50876 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 RAD23BP3-201ENST00000454157 1152 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 RN7SL107P-201ENST00000478127 283 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 RPS7P6-201ENST00000485777 579 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 AF186996.2-201ENST00000508347 907 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 PANCR-202ENST00000513690 448 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF144AP50876 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 RPS20-204ENST00000519606 424 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 MTND6P20-201ENST00000522986 418 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 AF235103.2-201ENST00000525753 346 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 PGAM1P8-201ENST00000526979 453 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 GSG1-206ENST00000537302 1028 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 AK6P1-201ENST00000540219 478 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 AC090515.3-201ENST00000560431 315 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF144AP50876 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC7.59□□□□□ -1.19
RNF144AP50876 CYP4A44P-201ENST00000569984 154 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 MIR3913-1-201ENST00000577744 102 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 AC015917.1-201ENST00000579654 510 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 SLC25A6P5-202ENST00000602729 1038 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 AC010385.2-201ENST00000603743 490 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC7.59□□□□□ -1.19
RNF144AP50876 AL157359.3-201ENST00000623771 217 ntBASIC7.59□□□□□ -1.19
RNF144AP50876 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC7.59□□□□□ -1.19
RNF144AP50876 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC7.59□□□□□ -1.19
RNF144AP50876 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 TRHR-201ENST00000311762 1415 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RNF144AP50876 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC7.59□□□□□ -1.19
RNF144AP50876 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
RNF144AP50876 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RNF144AP50876 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RNF144AP50876 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
RNF144AP50876 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
RNF144AP50876 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
RNF144AP50876 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.59□□□□□ -1.2
RNF144AP50876 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
RNF144AP50876 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 AL137918.1-201ENST00000624542 1922 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 AC002540.1-201ENST00000625023 1349 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC7.58□□□□□ -1.2
RNF144AP50876 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RNF144AP50876 METTL21EP-201ENST00000298105 713 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.58□□□□□ -1.2
RNF144AP50876 RNU6-621P-201ENST00000364752 109 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 RNU6-780P-201ENST00000391030 104 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 SNORA57.2-201ENST00000391265 128 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AL109918.1-202ENST00000406724 436 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 AL136968.2-201ENST00000407959 354 ntBASIC7.58□□□□□ -1.2
RNF144AP50876 RN7SKP152-201ENST00000410444 315 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms