Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CPT1AP50416 RN7SKP238-201ENST00000516483 249 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.06□□□□□ -1.28
CPT1AP50416 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC7.06□□□□□ -1.28
CPT1AP50416 AC026688.1-201ENST00000520639 1168 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.06□□□□□ -1.28
CPT1AP50416 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.06□□□□□ -1.28
CPT1AP50416 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.06□□□□□ -1.28
CPT1AP50416 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.06□□□□□ -1.28
CPT1AP50416 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.06□□□□□ -1.28
CPT1AP50416 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.06□□□□□ -1.28
CPT1AP50416 AL953862.2-201ENST00000603089 820 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 AC100767.2-201ENST00000604840 693 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.06□□□□□ -1.28
CPT1AP50416 AC005972.3-201ENST00000606304 481 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.06□□□□□ -1.28
CPT1AP50416 AC010998.3-201ENST00000613871 631 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.06□□□□□ -1.28
CPT1AP50416 AL512652.1-201ENST00000619006 500 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 AL391262.2-201ENST00000622466 494 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 AL132640.3-201ENST00000630473 177 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CPT1AP50416 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CPT1AP50416 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CPT1AP50416 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CPT1AP50416 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CPT1AP50416 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.06□□□□□ -1.28
CPT1AP50416 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
CPT1AP50416 OR52B5P-204ENST00000641744 3467 ntBASIC7.06□□□□□ -1.28
CPT1AP50416 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CPT1AP50416 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.06□□□□□ -1.28
CPT1AP50416 AC009237.3-203ENST00000442128 3551 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.05□□□□□ -1.28
CPT1AP50416 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.05□□□□□ -1.28
CPT1AP50416 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 KARSP1-201ENST00000451871 1752 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 AL596244.1-201ENST00000567068 3779 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 RNU6-891P-201ENST00000384280 111 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 LYPLA1P3-201ENST00000402650 695 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 AL713922.1-201ENST00000416477 747 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.05□□□□□ -1.28
CPT1AP50416 EIF2S2P3-201ENST00000428356 999 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 AC023141.3-201ENST00000436698 278 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 OR3D1P-201ENST00000438288 955 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 AC114878.1-201ENST00000441166 358 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 AC002553.3-201ENST00000453002 341 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 HMGN1P8-201ENST00000463578 288 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CPT1AP50416 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.05□□□□□ -1.28
CPT1AP50416 AC090958.1-201ENST00000511122 351 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.05□□□□□ -1.28
CPT1AP50416 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.05□□□□□ -1.28
CPT1AP50416 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.05□□□□□ -1.28
CPT1AP50416 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 RFPL4AP6-201ENST00000616792 846 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 AC245014.3-201ENST00000618589 347 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 MIR7159-201ENST00000620587 66 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
CPT1AP50416 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.05□□□□□ -1.28
CPT1AP50416 AC010624.4-201ENST00000597606 1351 ntBASIC7.05□□□□□ -1.28
CPT1AP50416 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
CPT1AP50416 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CPT1AP50416 CYP2G2P-201ENST00000594920 1485 ntBASIC7.04□□□□□ -1.28
CPT1AP50416 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CPT1AP50416 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CPT1AP50416 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CPT1AP50416 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.04□□□□□ -1.28
CPT1AP50416 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CPT1AP50416 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CPT1AP50416 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CPT1AP50416 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CPT1AP50416 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CPT1AP50416 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.04□□□□□ -1.28
CPT1AP50416 SNORA21-201ENST00000362423 132 ntBASIC7.04□□□□□ -1.28
CPT1AP50416 AL031985.1-201ENST00000392713 418 ntBASIC7.04□□□□□ -1.28
CPT1AP50416 RN7SKP206-201ENST00000410823 293 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms