Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MTND2P12-201ENST00000417560 1252 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC016908.1-201ENST00000442571 1219 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC079922.1-201ENST00000443291 359 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 RPL12P31-201ENST00000478433 450 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 RN7SL612P-201ENST00000497704 295 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 KHDC1P1-201ENST00000511053 508 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 SNORA74.1-201ENST00000516320 180 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 RNA5SP206-201ENST00000516703 121 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 RPA2P3-201ENST00000533268 770 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 MIR3189-201ENST00000578735 73 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 DYNLL1P1-201ENST00000595442 269 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 AL021368.3-201ENST00000607119 578 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC069542.2-201ENST00000624816 216 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 AC120036.2-201ENST00000509729 1474 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 LINC01613-201ENST00000561476 2780 ntBASIC5.55□□□□□ -1.52
CSNK1A1P48729 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CSNK1A1P48729 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
CSNK1A1P48729 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC110373.1-201ENST00000505994 3505 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 CCNT2P1-201ENST00000423082 1315 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC092724.1-201ENST00000624623 3397 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC092692.1-201ENST00000623625 2595 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 RN7SKP121-201ENST00000410842 305 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 HMGA1P8-201ENST00000414130 321 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC017078.1-201ENST00000416146 368 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 LINC00328-2P-201ENST00000436585 219 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 KF459542.1-201ENST00000450908 553 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 MARK2P8-201ENST00000476069 952 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 PPP1R11P1-201ENST00000486095 376 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 RN7SKP67-201ENST00000515905 235 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC027229.1-201ENST00000583887 253 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AL583832.1-201ENST00000603227 784 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC010998.3-201ENST00000613871 631 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 MIR6823-201ENST00000622118 61 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC003992.1-201ENST00000635364 557 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AOX3P-204ENST00000491025 2107 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CSNK1A1P48729 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 AP001541.1-201ENST00000623322 1904 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 AL137141.1-201ENST00000624622 4836 ntBASIC5.54□□□□□ -1.52
CSNK1A1P48729 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CSNK1A1P48729 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms