Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.04□□□□□ -1.44
ABCD3P28288 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.04□□□□□ -1.44
ABCD3P28288 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.04□□□□□ -1.44
ABCD3P28288 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.04□□□□□ -1.44
ABCD3P28288 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.04□□□□□ -1.44
ABCD3P28288 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.04□□□□□ -1.44
ABCD3P28288 MIR3157-201ENST00000578688 85 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 AC005726.4-201ENST00000582858 458 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 MIR212-201ENST00000586026 110 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 AC040174.2-201ENST00000602701 465 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 AL133247.2-201ENST00000603236 482 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 AC073333.2-201ENST00000603589 769 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 AL683813.2-201ENST00000605245 502 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 AL356490.1-201ENST00000623079 479 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
ABCD3P28288 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ABCD3P28288 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ABCD3P28288 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ABCD3P28288 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.04□□□□□ -1.44
ABCD3P28288 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
ABCD3P28288 AC062022.1-201ENST00000451026 1684 ntBASIC6.04□□□□□ -1.44
ABCD3P28288 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.04□□□□□ -1.44
ABCD3P28288 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 AC074141.1-201ENST00000588129 2995 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 UGT2B27P-201ENST00000505092 1620 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.03□□□□□ -1.44
ABCD3P28288 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ABCD3P28288 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 AC107977.1-201ENST00000355745 939 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 VIM2P-201ENST00000402383 1294 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 RPL10P10-201ENST00000403509 664 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ABCD3P28288 AL139415.1-201ENST00000424862 352 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 AC046176.1-201ENST00000435260 1170 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 MRPS21P3-201ENST00000436696 262 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 VN1R48P-201ENST00000448149 1036 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.03□□□□□ -1.44
ABCD3P28288 AC131392.1-201ENST00000506490 633 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 NACAP5-201ENST00000509863 636 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 FABP5P6-201ENST00000510588 409 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 AC093664.1-201ENST00000511779 289 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 SETP12-201ENST00000514068 805 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.03□□□□□ -1.44
ABCD3P28288 OR52K3P-201ENST00000531655 943 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ABCD3P28288 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.03□□□□□ -1.44
ABCD3P28288 SYPL1P2-201ENST00000582878 727 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.03□□□□□ -1.44
ABCD3P28288 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.03□□□□□ -1.44
ABCD3P28288 AC004805.3-201ENST00000603178 310 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 AC068726.1-201ENST00000610993 341 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 HTR1DP1-201ENST00000616500 888 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 OR8G7P-201ENST00000616658 848 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 AP001264.1-201ENST00000620602 703 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 AC007603.3-201ENST00000636915 979 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 AC025809.2-201ENST00000625085 1802 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
ABCD3P28288 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.03□□□□□ -1.44
ABCD3P28288 AC140479.2-201ENST00000421567 3130 ntBASIC6.03□□□□□ -1.44
ABCD3P28288 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
ABCD3P28288 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.03□□□□□ -1.44
ABCD3P28288 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
ABCD3P28288 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
ABCD3P28288 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
ABCD3P28288 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ABCD3P28288 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.02□□□□□ -1.45
ABCD3P28288 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ABCD3P28288 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.02□□□□□ -1.45
ABCD3P28288 AC013488.1-201ENST00000526618 1838 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms