Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.18□□□□□ -1.26
POLR2AP24928 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 AL353626.3-201ENST00000413399 657 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.17□□□□□ -1.26
POLR2AP24928 HMGB3P24-201ENST00000433260 622 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.17□□□□□ -1.26
POLR2AP24928 AC024558.1-201ENST00000505008 528 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.17□□□□□ -1.26
POLR2AP24928 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 uc_338.26-201ENST00000612659 160 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
POLR2AP24928 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.17□□□□□ -1.26
POLR2AP24928 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 CLCA3P-203ENST00000490028 2781 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 NEK2P4-201ENST00000425793 1329 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 AL512310.3-201ENST00000547023 1335 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 CR383656.5-201ENST00000547616 1340 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
POLR2AP24928 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 AP001541.1-201ENST00000623322 1904 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
POLR2AP24928 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 Y_RNA.625-201ENST00000411256 107 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.17□□□□□ -1.26
POLR2AP24928 AL355032.1-201ENST00000472981 438 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 AC109481.1-201ENST00000509173 282 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.17□□□□□ -1.26
POLR2AP24928 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.17□□□□□ -1.26
POLR2AP24928 WBP1LP3-201ENST00000523033 208 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.17□□□□□ -1.26
POLR2AP24928 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.17□□□□□ -1.26
POLR2AP24928 EIF4EP5-201ENST00000528228 640 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.17□□□□□ -1.26
POLR2AP24928 AC084033.1-201ENST00000550830 633 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 AL390726.5-202ENST00000564800 256 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.17□□□□□ -1.26
POLR2AP24928 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.17□□□□□ -1.26
POLR2AP24928 AL049840.6-201ENST00000604583 345 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 AL139407.1-201ENST00000613826 1175 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 AC020978.9-201ENST00000624380 1141 ntBASIC7.17□□□□□ -1.26
POLR2AP24928 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
POLR2AP24928 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.17□□□□□ -1.26
POLR2AP24928 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
POLR2AP24928 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
POLR2AP24928 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
POLR2AP24928 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
POLR2AP24928 AC011815.2-201ENST00000618230 2021 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 AC020978.8-201ENST00000571975 3022 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.16□□□□□ -1.26
POLR2AP24928 AC127024.8-201ENST00000623719 2094 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.16□□□□□ -1.26
POLR2AP24928 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.16□□□□□ -1.26
POLR2AP24928 CASC19-248ENST00000641674 1356 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 MIR433-201ENST00000384837 93 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.16□□□□□ -1.26
POLR2AP24928 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
POLR2AP24928 AK4P4-201ENST00000419465 646 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC7.16□□□□□ -1.26
POLR2AP24928 MTND2P39-201ENST00000457230 764 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 DUTP7-201ENST00000507982 486 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 IGLV2-28-201ENST00000520681 304 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.16□□□□□ -1.26
POLR2AP24928 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.16□□□□□ -1.26
POLR2AP24928 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.16□□□□□ -1.26
POLR2AP24928 AC004223.2-201ENST00000590309 544 ntBASIC7.16□□□□□ -1.26
POLR2AP24928 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms