Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.77□□□□□ -1.33
TPM1P09493 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.77□□□□□ -1.33
TPM1P09493 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TPM1P09493 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 AL136984.1-201ENST00000607611 1893 ntBASIC6.77□□□□□ -1.33
TPM1P09493 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.77□□□□□ -1.33
TPM1P09493 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM1P09493 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM1P09493 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TPM1P09493 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM1P09493 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM1P09493 RN7SKP39-201ENST00000410773 322 ntBASIC6.76□□□□□ -1.33
TPM1P09493 AC083862.1-201ENST00000427378 1242 ntBASIC6.76□□□□□ -1.33
TPM1P09493 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM1P09493 AL592114.2-201ENST00000440142 532 ntBASIC6.76□□□□□ -1.33
TPM1P09493 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM1P09493 AL845321.1-201ENST00000444603 348 ntBASIC6.76□□□□□ -1.33
TPM1P09493 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TPM1P09493 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
TPM1P09493 RN7SL70P-201ENST00000478322 302 ntBASIC6.76□□□□□ -1.33
TPM1P09493 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
TPM1P09493 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.76□□□□□ -1.33
TPM1P09493 AC026782.2-201ENST00000510845 636 ntBASIC6.76□□□□□ -1.33
TPM1P09493 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM1P09493 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM1P09493 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM1P09493 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM1P09493 RN7SL131P-201ENST00000579043 256 ntBASIC6.76□□□□□ -1.33
TPM1P09493 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.76□□□□□ -1.33
TPM1P09493 AC005332.4-201ENST00000592752 579 ntBASIC6.76□□□□□ -1.33
TPM1P09493 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 AL136097.3-201ENST00000611097 505 ntBASIC6.76□□□□□ -1.33
TPM1P09493 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM1P09493 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 AC103564.3-201ENST00000621194 220 ntBASIC6.76□□□□□ -1.33
TPM1P09493 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TPM1P09493 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TPM1P09493 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
TPM1P09493 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.76□□□□□ -1.33
TPM1P09493 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.76□□□□□ -1.33
TPM1P09493 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM1P09493 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM1P09493 AL359955.1-201ENST00000455242 3275 ntBASIC6.75□□□□□ -1.33
TPM1P09493 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
TPM1P09493 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM1P09493 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM1P09493 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
TPM1P09493 SNORA43.1-201ENST00000364863 140 ntBASIC6.75□□□□□ -1.33
TPM1P09493 RN7SKP221-201ENST00000410420 301 ntBASIC6.75□□□□□ -1.33
TPM1P09493 AL161742.1-201ENST00000418154 584 ntBASIC6.75□□□□□ -1.33
TPM1P09493 TRGV5P-201ENST00000419915 354 ntBASIC6.75□□□□□ -1.33
TPM1P09493 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.75□□□□□ -1.33
TPM1P09493 AL354707.3-201ENST00000427308 331 ntBASIC6.75□□□□□ -1.33
TPM1P09493 VTI1BP4-201ENST00000427516 527 ntBASIC6.75□□□□□ -1.33
TPM1P09493 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.75□□□□□ -1.33
TPM1P09493 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM1P09493 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM1P09493 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.75□□□□□ -1.33
TPM1P09493 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.75□□□□□ -1.33
TPM1P09493 RN7SL643P-201ENST00000471845 291 ntBASIC6.75□□□□□ -1.33
TPM1P09493 AC124945.1-201ENST00000485133 188 ntBASIC6.75□□□□□ -1.33
TPM1P09493 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.75□□□□□ -1.33
TPM1P09493 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.75□□□□□ -1.33
TPM1P09493 AC096661.1-201ENST00000515870 822 ntBASIC6.75□□□□□ -1.33
TPM1P09493 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.75□□□□□ -1.33
TPM1P09493 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.75□□□□□ -1.33
TPM1P09493 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.75□□□□□ -1.33
TPM1P09493 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.75□□□□□ -1.33
TPM1P09493 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.75□□□□□ -1.33
TPM1P09493 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.75□□□□□ -1.33
TPM1P09493 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TPM1P09493 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
TPM1P09493 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TPM1P09493 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.74□□□□□ -1.33
TPM1P09493 AC140479.2-201ENST00000421567 3130 ntBASIC6.74□□□□□ -1.33
TPM1P09493 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
TPM1P09493 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.74□□□□□ -1.33
TPM1P09493 UGT2B24P-201ENST00000514441 1597 ntBASIC6.74□□□□□ -1.33
TPM1P09493 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.74□□□□□ -1.33
TPM1P09493 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
TPM1P09493 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
TPM1P09493 RNU1-84P-201ENST00000365447 164 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms