Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RFPL4AP6-201ENST00000616792 846 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC129778.1-202ENST00000623812 261 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC4P09017 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC4P09017 AC022726.2-201ENST00000634673 547 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AL591379.1-207ENST00000635982 261 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
HOXC4P09017 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC4P09017 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC4P09017 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 AC073365.1-203ENST00000641055 1992 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.09□□□□□ -1.44
HOXC4P09017 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.09□□□□□ -1.44
HOXC4P09017 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HOXC4P09017 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
HOXC4P09017 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HOXC4P09017 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HOXC4P09017 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HOXC4P09017 RBMY1HP-201ENST00000382759 1389 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC4P09017 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC4P09017 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXC4P09017 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXC4P09017 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 AL359976.1-201ENST00000418655 3528 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC4P09017 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HOXC4P09017 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC4P09017 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC4P09017 RN7SKP161-201ENST00000411110 305 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC4P09017 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 DNAJA1P5-201ENST00000440278 943 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 ATP5LP2-201ENST00000440646 311 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 EIF5AP4-201ENST00000441206 465 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 AL022237.1-201ENST00000446663 358 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 AL359839.1-201ENST00000451975 1160 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 AC094085.1-201ENST00000468914 584 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 AC098847.1-201ENST00000473094 348 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 FTH1P8-201ENST00000498161 514 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC025458.1-201ENST00000506046 166 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 AL158068.1-201ENST00000506116 616 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC4P09017 AP003396.4-201ENST00000527574 265 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC4P09017 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
HOXC4P09017 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC079905.1-201ENST00000549280 475 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC027229.1-201ENST00000583887 253 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC4P09017 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.08□□□□□ -1.44
HOXC4P09017 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC024589.2-201ENST00000605642 1294 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 AC005899.7-201ENST00000618199 588 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 AL162377.2-201ENST00000624532 337 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 CDY5P-201ENST00000411487 1580 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 CDY9P-201ENST00000451397 1580 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.08□□□□□ -1.44
HOXC4P09017 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 AC006213.6-201ENST00000623722 4179 ntBASIC6.08□□□□□ -1.44
HOXC4P09017 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC4P09017 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.08□□□□□ -1.44
HOXC4P09017 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.08□□□□□ -1.44
HOXC4P09017 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HOXC4P09017 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 AC034229.2-201ENST00000566945 2508 ntBASIC6.07□□□□□ -1.44
HOXC4P09017 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
HOXC4P09017 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.07□□□□□ -1.44
HOXC4P09017 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HOXC4P09017 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms