Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.94□□□□□ -1.14
COL5A2P05997 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.94□□□□□ -1.14
COL5A2P05997 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A2P05997 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.94□□□□□ -1.14
COL5A2P05997 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A2P05997 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 PARP4P2-201ENST00000446672 3326 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 AC089998.1-201ENST00000548575 3141 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.93□□□□□ -1.14
COL5A2P05997 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
COL5A2P05997 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
COL5A2P05997 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.93□□□□□ -1.14
COL5A2P05997 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
COL5A2P05997 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 RNA5SP350-201ENST00000363298 111 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 AP000534.2-201ENST00000412729 568 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 FTH1P10-202ENST00000430907 550 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.93□□□□□ -1.14
COL5A2P05997 AC073594.1-201ENST00000462065 364 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 AC005532.2-201ENST00000467154 373 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 AC022215.1-201ENST00000481770 362 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.93□□□□□ -1.14
COL5A2P05997 OR5M14P-201ENST00000506803 618 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.93□□□□□ -1.14
COL5A2P05997 AC119403.2-201ENST00000590960 598 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 AL445647.2-201ENST00000615170 130 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 AC021766.1-201ENST00000624404 741 ntBASIC7.93□□□□□ -1.14
COL5A2P05997 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
COL5A2P05997 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.93□□□□□ -1.14
COL5A2P05997 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.93□□□□□ -1.14
COL5A2P05997 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
COL5A2P05997 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
COL5A2P05997 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
COL5A2P05997 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 AC117409.1-201ENST00000470499 1310 ntBASIC7.92□□□□□ -1.14
COL5A2P05997 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 RNA5SP443-201ENST00000363083 132 ntBASIC7.92□□□□□ -1.14
COL5A2P05997 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.92□□□□□ -1.14
COL5A2P05997 RN7SKP29-201ENST00000410957 272 ntBASIC7.92□□□□□ -1.14
COL5A2P05997 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.92□□□□□ -1.14
COL5A2P05997 TNPO1P1-201ENST00000423641 1138 ntBASIC7.92□□□□□ -1.14
COL5A2P05997 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.92□□□□□ -1.14
COL5A2P05997 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.92□□□□□ -1.14
COL5A2P05997 AL157777.1-201ENST00000468100 304 ntBASIC7.92□□□□□ -1.14
COL5A2P05997 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.92□□□□□ -1.14
COL5A2P05997 AC004815.1-201ENST00000484185 331 ntBASIC7.92□□□□□ -1.14
COL5A2P05997 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.92□□□□□ -1.14
COL5A2P05997 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.92□□□□□ -1.14
COL5A2P05997 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.92□□□□□ -1.14
COL5A2P05997 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
COL5A2P05997 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.92□□□□□ -1.14
COL5A2P05997 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.92□□□□□ -1.14
COL5A2P05997 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.92□□□□□ -1.14
COL5A2P05997 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.92□□□□□ -1.14
COL5A2P05997 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.92□□□□□ -1.14
COL5A2P05997 AC024255.1-201ENST00000614376 102 ntBASIC7.92□□□□□ -1.14
COL5A2P05997 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.92□□□□□ -1.14
COL5A2P05997 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.92□□□□□ -1.14
COL5A2P05997 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC7.92□□□□□ -1.14
COL5A2P05997 AL049634.1-201ENST00000453770 1720 ntBASIC7.92□□□□□ -1.14
COL5A2P05997 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL5A2P05997 AL136531.3-201ENST00000624378 3658 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 LINC02019-201ENST00000608605 2060 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
COL5A2P05997 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
COL5A2P05997 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
COL5A2P05997 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
COL5A2P05997 AL359091.1-201ENST00000449048 1734 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.91□□□□□ -1.14
COL5A2P05997 MIR1286-201ENST00000408112 78 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 RN7SKP216-201ENST00000411050 312 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 AC006455.6-201ENST00000426192 893 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 NIPA2P1-201ENST00000426223 976 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 AC097721.1-201ENST00000427150 1253 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 AL022331.1-201ENST00000429025 477 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 HMGB3P24-201ENST00000433260 622 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 RPL35AP19-201ENST00000469425 329 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 RN7SL547P-201ENST00000490793 290 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 AC083795.1-201ENST00000491760 320 ntBASIC7.91□□□□□ -1.14
COL5A2P05997 HMGB1P42-201ENST00000532126 553 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms