Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 CLNS1AP1-201ENST00000435954 682 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 SEPT14P12-201ENST00000442280 560 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 RPL23AP60-201ENST00000450011 454 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 AL445687.2-201ENST00000458156 728 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 RN7SL352P-201ENST00000466002 277 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 CYP4F27P-201ENST00000514557 494 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 MIR6780B-201ENST00000610307 79 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 AC068769.1-201ENST00000474767 2426 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 AC110716.2-201ENST00000563865 3945 ntBASIC6.18□□□□□ -1.42
HLA-DQB2P05538 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AC016583.1-201ENST00000624221 2431 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 RNU1-134P-201ENST00000362935 165 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 RNU105B-201ENST00000364478 208 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AL731534.1-201ENST00000434711 269 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 RPL5P7-201ENST00000444235 813 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 FTLP8-201ENST00000446770 267 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AL355032.1-201ENST00000472981 438 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AC021006.1-201ENST00000489849 553 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 RN7SKP35-201ENST00000517210 151 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 MIR4502-201ENST00000580432 81 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AC124916.2-201ENST00000604416 224 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AL645933.2-201ENST00000606743 1207 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 FAM27E2-201ENST00000619668 403 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 MIR6806-201ENST00000622141 64 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 AL683826.1-201ENST00000624104 627 ntBASIC6.17□□□□□ -1.42
HLA-DQB2P05538 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HLA-DQB2P05538 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 OR52I1-201ENST00000450052 1050 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC016027.4-201ENST00000450866 277 ntBASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DQB2P05538 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms