Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.2□□□□□ -1.58
CD74P04233 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.2□□□□□ -1.58
CD74P04233 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.2□□□□□ -1.58
CD74P04233 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.2□□□□□ -1.58
CD74P04233 AC073046.2-201ENST00000604756 527 ntBASIC5.2□□□□□ -1.58
CD74P04233 LSM1P2-201ENST00000604911 322 ntBASIC5.2□□□□□ -1.58
CD74P04233 RAB28P4-201ENST00000622233 665 ntBASIC5.2□□□□□ -1.58
CD74P04233 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
CD74P04233 AC027279.4-201ENST00000624371 2072 ntBASIC5.2□□□□□ -1.58
CD74P04233 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CD74P04233 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CD74P04233 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CD74P04233 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.2□□□□□ -1.58
CD74P04233 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 AC095038.1-201ENST00000429248 1591 ntBASIC5.2□□□□□ -1.58
CD74P04233 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.2□□□□□ -1.58
CD74P04233 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CD74P04233 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD74P04233 AL136984.1-201ENST00000607611 1893 ntBASIC5.2□□□□□ -1.58
CD74P04233 CDY3P-201ENST00000454543 1618 ntBASIC5.19□□□□□ -1.58
CD74P04233 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.19□□□□□ -1.58
CD74P04233 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.19□□□□□ -1.58
CD74P04233 AC126474.2-201ENST00000623268 1750 ntBASIC5.19□□□□□ -1.58
CD74P04233 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.19□□□□□ -1.58
CD74P04233 AL161756.3-201ENST00000641216 2071 ntBASIC5.19□□□□□ -1.58
CD74P04233 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CD74P04233 SNORA43.1-201ENST00000364863 140 ntBASIC5.19□□□□□ -1.58
CD74P04233 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.19□□□□□ -1.58
CD74P04233 U3.52-201ENST00000384034 216 ntBASIC5.19□□□□□ -1.58
CD74P04233 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 RPS14P4-201ENST00000415880 418 ntBASIC5.19□□□□□ -1.58
CD74P04233 MEAF6P1-201ENST00000416092 327 ntBASIC5.19□□□□□ -1.58
CD74P04233 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.19□□□□□ -1.58
CD74P04233 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.19□□□□□ -1.58
CD74P04233 AHCYP8-201ENST00000425108 209 ntBASIC5.19□□□□□ -1.58
CD74P04233 AC009303.1-201ENST00000426307 352 ntBASIC5.19□□□□□ -1.58
CD74P04233 AC092646.1-201ENST00000427142 901 ntBASIC5.19□□□□□ -1.58
CD74P04233 AC083862.1-201ENST00000427378 1242 ntBASIC5.19□□□□□ -1.58
CD74P04233 VTI1BP4-201ENST00000427516 527 ntBASIC5.19□□□□□ -1.58
CD74P04233 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.19□□□□□ -1.58
CD74P04233 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.19□□□□□ -1.58
CD74P04233 RPL23AP60-201ENST00000450011 454 ntBASIC5.19□□□□□ -1.58
CD74P04233 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.19□□□□□ -1.58
CD74P04233 AL133480.2-201ENST00000456723 487 ntBASIC5.19□□□□□ -1.58
CD74P04233 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.19□□□□□ -1.58
CD74P04233 RN7SL352P-201ENST00000466002 277 ntBASIC5.19□□□□□ -1.58
CD74P04233 RN7SL714P-201ENST00000487050 298 ntBASIC5.19□□□□□ -1.58
CD74P04233 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.19□□□□□ -1.58
CD74P04233 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.19□□□□□ -1.58
CD74P04233 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 NF1P12-201ENST00000549593 583 ntBASIC5.19□□□□□ -1.58
CD74P04233 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.19□□□□□ -1.58
CD74P04233 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.19□□□□□ -1.58
CD74P04233 AC006115.2-201ENST00000596823 202 ntBASIC5.19□□□□□ -1.58
CD74P04233 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.19□□□□□ -1.58
CD74P04233 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.19□□□□□ -1.58
CD74P04233 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
CD74P04233 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.19□□□□□ -1.58
CD74P04233 OR7A1P-202ENST00000641542 1158 ntBASIC5.19□□□□□ -1.58
CD74P04233 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.19□□□□□ -1.58
CD74P04233 AC016583.1-201ENST00000624221 2431 ntBASIC5.19□□□□□ -1.58
CD74P04233 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CD74P04233 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CD74P04233 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.19□□□□□ -1.58
CD74P04233 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.19□□□□□ -1.58
CD74P04233 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.19□□□□□ -1.58
CD74P04233 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD74P04233 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CD74P04233 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.18□□□□□ -1.58
CD74P04233 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 AL158152.1-201ENST00000602652 1435 ntBASIC5.18□□□□□ -1.58
CD74P04233 AC004076.2-201ENST00000620532 3323 ntBASIC5.18□□□□□ -1.58
CD74P04233 RNA5SP382-201ENST00000363355 112 ntBASIC5.18□□□□□ -1.58
CD74P04233 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD74P04233 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CD74P04233 ZNF37CP-201ENST00000406795 241 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms