Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU4-91P-201ENST00000364778 135 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 SNORA75-201ENST00000384158 137 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 RNY3P10-201ENST00000384764 102 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PDGFAP04085 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 AL157698.1-201ENST00000415190 1011 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AL590806.1-201ENST00000415818 853 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 AC019050.1-201ENST00000418508 492 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 RNGTTP1-201ENST00000420965 728 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.36□□□□□ -1.23
PDGFAP04085 VDAC1P2-201ENST00000423609 850 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 MTND6P5-201ENST00000448266 512 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 RANP1-206ENST00000455094 651 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 TPT1P7-201ENST00000458300 517 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 RN7SL418P-201ENST00000473031 287 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 AC018639.1-201ENST00000492994 442 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.36□□□□□ -1.23
PDGFAP04085 AC097263.1-201ENST00000496795 606 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AC096751.1-202ENST00000502691 1067 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC7.36□□□□□ -1.23
PDGFAP04085 MTND2P33-201ENST00000506452 1031 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 ATP1B1P1-201ENST00000509767 915 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AC113191.1-201ENST00000517759 403 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 AC090159.1-201ENST00000525309 806 ntTSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC7.36□□□□□ -1.23
PDGFAP04085 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 SLC25A51P2-201ENST00000535708 889 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 AP000619.1-201ENST00000540293 1000 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.36□□□□□ -1.23
PDGFAP04085 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.36□□□□□ -1.23
PDGFAP04085 AL365181.4-201ENST00000609800 547 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.36□□□□□ -1.23
PDGFAP04085 PTCHD3P1-201ENST00000612350 537 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 MIR7844-201ENST00000616161 122 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.36□□□□□ -1.23
PDGFAP04085 BX005040.2-201ENST00000620504 370 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AC016582.3-206ENST00000636547 207 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.36□□□□□ -1.23
PDGFAP04085 AC099063.3-201ENST00000642066 185 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC7.36□□□□□ -1.23
PDGFAP04085 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC7.36□□□□□ -1.23
PDGFAP04085 ATP8A2P3-201ENST00000426792 1536 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 AC006600.2-201ENST00000624834 2506 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PDGFAP04085 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.36□□□□□ -1.23
PDGFAP04085 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.36□□□□□ -1.23
PDGFAP04085 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PDGFAP04085 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
PDGFAP04085 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.35□□□□□ -1.23
PDGFAP04085 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
PDGFAP04085 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.35□□□□□ -1.23
PDGFAP04085 RNU6-452P-201ENST00000384406 107 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 OLA1P1-201ENST00000396387 1189 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PDGFAP04085 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.35□□□□□ -1.23
PDGFAP04085 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.35□□□□□ -1.23
PDGFAP04085 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.35□□□□□ -1.23
PDGFAP04085 AL138479.1-201ENST00000426913 484 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 AC010975.2-201ENST00000427781 588 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 MTCO1P54-201ENST00000430139 712 ntBASIC7.35□□□□□ -1.23
PDGFAP04085 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms