Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NKX2-2O95096 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.87□□□□□ -1.47
NKX2-2O95096 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 RNA5SP485-201ENST00000365053 119 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 SNORA70H-201ENST00000383910 135 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 SNORA70J-201ENST00000384182 135 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 RNU11-6P-201ENST00000391127 133 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 EEF1B2P8-201ENST00000414101 671 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 RAB9AP4-201ENST00000415230 609 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-2O95096 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 ARAFP1-201ENST00000422172 605 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 MTND2P11-201ENST00000423638 648 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-2O95096 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-2O95096 OR2L9P-201ENST00000444456 913 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 COX4I1P2-201ENST00000447446 547 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-2O95096 RN7SL369P-201ENST00000477138 299 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 GM2AP2-201ENST00000491764 562 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 SETP21-201ENST00000514799 892 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-2O95096 OR10D4P-201ENST00000525892 951 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-2O95096 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX2-2O95096 MIR3189-201ENST00000578735 73 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 MIR3908-201ENST00000579798 126 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 MIR5010-201ENST00000582846 120 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 AL589765.6-201ENST00000601909 549 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 AL162233.1-201ENST00000620014 944 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 AC119674.1-220ENST00000641502 1048 ntBASIC5.86□□□□□ -1.47
NKX2-2O95096 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NKX2-2O95096 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX2-2O95096 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX2-2O95096 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
NKX2-2O95096 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX2-2O95096 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
NKX2-2O95096 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
NKX2-2O95096 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX2-2O95096 AC092692.1-201ENST00000623625 2595 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX2-2O95096 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX2-2O95096 RNU6-152P-201ENST00000384037 107 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 RNU6-316P-201ENST00000391027 107 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AC003045.1-201ENST00000398779 713 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AL133260.1-201ENST00000405720 405 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 AC116036.1-201ENST00000412199 367 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.85□□□□□ -1.47
NKX2-2O95096 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 AL356806.1-201ENST00000422524 916 ntBASIC5.85□□□□□ -1.47
NKX2-2O95096 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX2-2O95096 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX2-2O95096 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms