Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1BO75841 RN7SL815P-201ENST00000470970 290 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 RN7SL836P-201ENST00000476140 296 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 RN7SL338P-201ENST00000481467 293 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 TAAR3P-202ENST00000481759 1025 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 RN7SL714P-201ENST00000487050 298 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1BO75841 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1BO75841 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1BO75841 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 BCAS2P1-201ENST00000528022 632 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.2□□□□□ -1.58
UPK1BO75841 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1BO75841 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.2□□□□□ -1.58
UPK1BO75841 AC012157.1-201ENST00000549725 501 ntTSL 4 BASIC5.2□□□□□ -1.58
UPK1BO75841 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1BO75841 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1BO75841 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC5.2□□□□□ -1.58
UPK1BO75841 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1BO75841 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1BO75841 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1BO75841 RN7SL261P-201ENST00000613441 282 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.2□□□□□ -1.58
UPK1BO75841 MIR6754-201ENST00000621121 66 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 AC079456.1-201ENST00000624010 480 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC5.2□□□□□ -1.58
UPK1BO75841 GVINP1-202ENST00000531871 7271 ntBASIC5.2□□□□□ -1.58
UPK1BO75841 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1BO75841 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1BO75841 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.2□□□□□ -1.58
UPK1BO75841 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1BO75841 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1BO75841 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
UPK1BO75841 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
UPK1BO75841 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
UPK1BO75841 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 ADAM5-202ENST00000399789 1942 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1BO75841 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 RN7SKP74-201ENST00000362849 309 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 CTSL3P-202ENST00000412179 788 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1BO75841 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1BO75841 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1BO75841 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1BO75841 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 AC105052.2-201ENST00000434317 794 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1BO75841 GAPDHP23-201ENST00000444823 993 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 UBBP5-201ENST00000446970 266 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1BO75841 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 EIF3KP1-201ENST00000513279 656 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 IGLV3-24-201ENST00000517477 197 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1BO75841 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC5.19□□□□□ -1.58
UPK1BO75841 SETP17-201ENST00000534163 817 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 DPPA3P2-202ENST00000557188 1219 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 TPRX1P1-201ENST00000557620 319 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1BO75841 TREM1-204ENST00000589614 772 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
UPK1BO75841 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1BO75841 AL049840.6-201ENST00000604583 345 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 AC092960.1-201ENST00000604762 351 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 BNIP3P41-202ENST00000616656 861 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 AC244153.1-201ENST00000617990 702 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1BO75841 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 HLA-B-257ENST00000640094 147 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 SAMMSON-227ENST00000642114 1199 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1BO75841 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1BO75841 AC068870.3-201ENST00000625077 2536 ntBASIC5.19□□□□□ -1.58
UPK1BO75841 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
UPK1BO75841 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.18□□□□□ -1.58
UPK1BO75841 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.18□□□□□ -1.58
UPK1BO75841 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.18□□□□□ -1.58
UPK1BO75841 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms