Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 AL031123.3-201ENST00000623345 1837 ntBASIC2.59□□□□□ -2
USH2AO75445 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -2
USH2AO75445 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 AL122126.1-201ENST00000546905 1318 ntBASIC2.59□□□□□ -2
USH2AO75445 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
USH2AO75445 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
USH2AO75445 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC2.59□□□□□ -2
USH2AO75445 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 ZNF658B-201ENST00000602828 3408 ntBASIC2.59□□□□□ -2
USH2AO75445 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC2.59□□□□□ -2
USH2AO75445 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC2.59□□□□□ -2
USH2AO75445 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
USH2AO75445 COX6B1P1-201ENST00000415962 213 ntBASIC2.59□□□□□ -2
USH2AO75445 AC004690.1-201ENST00000418216 328 ntBASIC2.59□□□□□ -2
USH2AO75445 OR6D1P-201ENST00000436165 939 ntBASIC2.59□□□□□ -2
USH2AO75445 AL138878.2-201ENST00000440581 1241 ntBASIC2.59□□□□□ -2
USH2AO75445 MIR4715-201ENST00000584117 79 ntBASIC2.59□□□□□ -2
USH2AO75445 AC069307.1-201ENST00000602820 447 ntBASIC2.59□□□□□ -2
USH2AO75445 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC2.59□□□□□ -2
USH2AO75445 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC2.59□□□□□ -2
USH2AO75445 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC2.59□□□□□ -2
USH2AO75445 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC2.59□□□□□ -2
USH2AO75445 TEX41-254ENST00000626394 423 ntTSL 5 BASIC2.59□□□□□ -2
USH2AO75445 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 ZNF772-201ENST00000343280 5419 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 AC068870.1-201ENST00000563737 2455 ntBASIC2.59□□□□□ -2
USH2AO75445 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC2.59□□□□□ -2
USH2AO75445 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
USH2AO75445 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 AC012653.2-201ENST00000621880 420 ntBASIC2.58□□□□□ -2
USH2AO75445 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
USH2AO75445 AC008957.3-201ENST00000624112 2242 ntBASIC2.58□□□□□ -2
USH2AO75445 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
USH2AO75445 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC2.58□□□□□ -2
USH2AO75445 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 RNU6-761P-201ENST00000384148 107 ntBASIC2.58□□□□□ -2
USH2AO75445 SNORA11.1-201ENST00000408133 129 ntBASIC2.58□□□□□ -2
USH2AO75445 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 EIF2S2P2-201ENST00000447161 982 ntBASIC2.58□□□□□ -2
USH2AO75445 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 AC008481.1-201ENST00000463278 396 ntBASIC2.58□□□□□ -2
USH2AO75445 RPS3AP15-201ENST00000483874 781 ntBASIC2.58□□□□□ -2
USH2AO75445 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC2.58□□□□□ -2
USH2AO75445 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC2.58□□□□□ -2
USH2AO75445 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC2.58□□□□□ -2
USH2AO75445 AC013701.1-201ENST00000522657 465 ntBASIC2.58□□□□□ -2
USH2AO75445 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 AC008033.2-201ENST00000542626 177 ntBASIC2.58□□□□□ -2
USH2AO75445 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC2.58□□□□□ -2
USH2AO75445 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC2.58□□□□□ -2
USH2AO75445 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 EML5-201ENST00000380664 5910 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC2.58□□□□□ -2
USH2AO75445 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
USH2AO75445 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USH2AO75445 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms