Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
SCN2BO60939 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN2BO60939 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN2BO60939 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
SCN2BO60939 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SCN2BO60939 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN2BO60939 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN2BO60939 AL359091.1-201ENST00000449048 1734 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN2BO60939 AC099654.3-201ENST00000447087 1546 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 RNU1-49P-201ENST00000363468 159 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 ARSFP1-201ENST00000398758 477 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 AL157702.1-201ENST00000398764 426 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.86□□□□□ -1.47
SCN2BO60939 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SCN2BO60939 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.86□□□□□ -1.47
SCN2BO60939 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.86□□□□□ -1.47
SCN2BO60939 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN2BO60939 OR6R1P-201ENST00000431838 940 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 AL645939.3-201ENST00000435408 225 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 AL390879.1-201ENST00000439143 386 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN2BO60939 GAPDHP23-201ENST00000444823 993 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 RN7SL502P-201ENST00000481857 290 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.86□□□□□ -1.47
SCN2BO60939 SNX18P24-201ENST00000505249 671 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 KHDC1P1-201ENST00000511053 508 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.86□□□□□ -1.47
SCN2BO60939 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.86□□□□□ -1.47
SCN2BO60939 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.86□□□□□ -1.47
SCN2BO60939 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN2BO60939 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN2BO60939 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SCN2BO60939 MIR4732-201ENST00000581873 76 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SCN2BO60939 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 AL137067.2-201ENST00000621202 131 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 MIR6503-201ENST00000622884 86 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN2BO60939 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SCN2BO60939 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SCN2BO60939 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SCN2BO60939 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.86□□□□□ -1.47
SCN2BO60939 TTC41P-205ENST00000551270 3963 ntBASIC5.86□□□□□ -1.47
SCN2BO60939 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
SCN2BO60939 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SCN2BO60939 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SCN2BO60939 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.86□□□□□ -1.47
SCN2BO60939 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN2BO60939 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN2BO60939 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN2BO60939 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN2BO60939 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 MSL3P1-202ENST00000440028 1468 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.85□□□□□ -1.47
SCN2BO60939 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 PTCD2P2-201ENST00000415579 1095 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.85□□□□□ -1.47
SCN2BO60939 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.85□□□□□ -1.47
SCN2BO60939 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.85□□□□□ -1.47
SCN2BO60939 SOCS5P1-201ENST00000440415 949 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 OR2L9P-201ENST00000444456 913 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 WDR82P2-201ENST00000444540 928 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 COX4I1P2-201ENST00000447446 547 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.85□□□□□ -1.47
SCN2BO60939 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.85□□□□□ -1.47
SCN2BO60939 AC022730.1-201ENST00000473114 568 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 RPS7P11-201ENST00000484240 586 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 GM2AP2-201ENST00000491764 562 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 OR4D12P-201ENST00000509361 911 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN2BO60939 RNU4ATAC-201ENST00000580972 127 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.85□□□□□ -1.47
SCN2BO60939 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.85□□□□□ -1.47
SCN2BO60939 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN2BO60939 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.85□□□□□ -1.47
SCN2BO60939 U91328.4-201ENST00000608919 517 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 AP000550.3-201ENST00000637734 379 ntBASIC5.85□□□□□ -1.47
SCN2BO60939 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms