Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.91□□□□□ -1.46
HCN1O60741 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HCN1O60741 MSL3P1-202ENST00000440028 1468 ntBASIC5.9□□□□□ -1.46
HCN1O60741 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HCN1O60741 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HCN1O60741 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.9□□□□□ -1.46
HCN1O60741 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.9□□□□□ -1.46
HCN1O60741 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HCN1O60741 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HCN1O60741 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HCN1O60741 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HCN1O60741 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.9□□□□□ -1.46
HCN1O60741 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.9□□□□□ -1.46
HCN1O60741 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HCN1O60741 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HCN1O60741 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.9□□□□□ -1.46
HCN1O60741 RPL5P20-201ENST00000403848 896 ntBASIC5.9□□□□□ -1.46
HCN1O60741 TMA16P2-201ENST00000413187 601 ntBASIC5.9□□□□□ -1.46
HCN1O60741 NME1P1-201ENST00000420914 382 ntBASIC5.9□□□□□ -1.46
HCN1O60741 SETP9-201ENST00000423837 832 ntBASIC5.9□□□□□ -1.46
HCN1O60741 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.9□□□□□ -1.46
HCN1O60741 GTF3AP6-201ENST00000432585 986 ntBASIC5.9□□□□□ -1.46
HCN1O60741 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.9□□□□□ -1.46
HCN1O60741 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.9□□□□□ -1.46
HCN1O60741 AC236972.4-201ENST00000458091 963 ntBASIC5.9□□□□□ -1.46
HCN1O60741 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.9□□□□□ -1.46
HCN1O60741 H3F3AP5-201ENST00000475267 429 ntBASIC5.9□□□□□ -1.46
HCN1O60741 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HCN1O60741 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.9□□□□□ -1.46
HCN1O60741 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.9□□□□□ -1.46
HCN1O60741 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.9□□□□□ -1.46
HCN1O60741 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.9□□□□□ -1.46
HCN1O60741 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.9□□□□□ -1.46
HCN1O60741 AC007494.1-201ENST00000562293 760 ntBASIC5.9□□□□□ -1.46
HCN1O60741 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.9□□□□□ -1.46
HCN1O60741 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.9□□□□□ -1.46
HCN1O60741 AL353684.1-201ENST00000622677 1120 ntBASIC5.9□□□□□ -1.46
HCN1O60741 AL122023.1-201ENST00000622847 530 ntBASIC5.9□□□□□ -1.46
HCN1O60741 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
HCN1O60741 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HCN1O60741 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
HCN1O60741 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HCN1O60741 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
HCN1O60741 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HCN1O60741 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HCN1O60741 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.9□□□□□ -1.47
HCN1O60741 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
HCN1O60741 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
HCN1O60741 MAPK10-287ENST00000641217 3037 ntBASIC5.9□□□□□ -1.47
HCN1O60741 NCOA4P2-201ENST00000340589 1813 ntBASIC5.9□□□□□ -1.47
HCN1O60741 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.9□□□□□ -1.47
HCN1O60741 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.9□□□□□ -1.47
HCN1O60741 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.9□□□□□ -1.47
HCN1O60741 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
HCN1O60741 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.9□□□□□ -1.47
HCN1O60741 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HCN1O60741 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HCN1O60741 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
HCN1O60741 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HCN1O60741 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HCN1O60741 RNA5SP232-201ENST00000364144 119 ntBASIC5.89□□□□□ -1.47
HCN1O60741 CXADRP1-201ENST00000398098 1095 ntBASIC5.89□□□□□ -1.47
HCN1O60741 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 RNA5SP198-201ENST00000410376 127 ntBASIC5.89□□□□□ -1.47
HCN1O60741 RPS26P38-201ENST00000414476 348 ntBASIC5.89□□□□□ -1.47
HCN1O60741 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.89□□□□□ -1.47
HCN1O60741 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.89□□□□□ -1.47
HCN1O60741 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.89□□□□□ -1.47
HCN1O60741 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.89□□□□□ -1.47
HCN1O60741 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 AC022415.1-202ENST00000486612 523 ntBASIC5.89□□□□□ -1.47
HCN1O60741 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 AC106822.1-201ENST00000502647 526 ntBASIC5.89□□□□□ -1.47
HCN1O60741 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.89□□□□□ -1.47
HCN1O60741 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.89□□□□□ -1.47
HCN1O60741 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.89□□□□□ -1.47
HCN1O60741 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.89□□□□□ -1.47
HCN1O60741 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HCN1O60741 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 AC023389.2-201ENST00000580031 955 ntBASIC5.89□□□□□ -1.47
HCN1O60741 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.89□□□□□ -1.47
HCN1O60741 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.89□□□□□ -1.47
HCN1O60741 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.89□□□□□ -1.47
HCN1O60741 AC024589.2-201ENST00000605642 1294 ntBASIC5.89□□□□□ -1.47
HCN1O60741 SNORA74.4-201ENST00000607595 199 ntBASIC5.89□□□□□ -1.47
HCN1O60741 CXADRP3-202ENST00000617265 1100 ntBASIC5.89□□□□□ -1.47
HCN1O60741 MIR6811-201ENST00000620409 58 ntBASIC5.89□□□□□ -1.47
HCN1O60741 AL683826.1-201ENST00000624104 627 ntBASIC5.89□□□□□ -1.47
HCN1O60741 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.89□□□□□ -1.47
HCN1O60741 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms