Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SNX3O60493 AP001029.2-203ENST00000589795 4910 ntBASIC5.98□□□□□ -1.45
SNX3O60493 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.98□□□□□ -1.45
SNX3O60493 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 AC130304.1-201ENST00000622942 2385 ntBASIC5.98□□□□□ -1.45
SNX3O60493 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SNX3O60493 SNORA30B-201ENST00000365319 129 ntBASIC5.98□□□□□ -1.45
SNX3O60493 RN7SKP69-201ENST00000365390 305 ntBASIC5.98□□□□□ -1.45
SNX3O60493 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 RNU1-56P-201ENST00000391303 164 ntBASIC5.98□□□□□ -1.45
SNX3O60493 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 RN7SKP279-201ENST00000411383 298 ntBASIC5.98□□□□□ -1.45
SNX3O60493 AC083862.1-201ENST00000427378 1242 ntBASIC5.98□□□□□ -1.45
SNX3O60493 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 AC022080.2-201ENST00000452932 533 ntBASIC5.98□□□□□ -1.45
SNX3O60493 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX3O60493 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX3O60493 RPSAP51-201ENST00000497462 645 ntBASIC5.98□□□□□ -1.45
SNX3O60493 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 CCDC11P1-201ENST00000503137 1162 ntBASIC5.98□□□□□ -1.45
SNX3O60493 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.98□□□□□ -1.45
SNX3O60493 OR4A43P-201ENST00000532938 908 ntBASIC5.98□□□□□ -1.45
SNX3O60493 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.98□□□□□ -1.45
SNX3O60493 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX3O60493 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 AC005495.1-201ENST00000586611 1211 ntBASIC5.98□□□□□ -1.45
SNX3O60493 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.98□□□□□ -1.45
SNX3O60493 AC079791.1-201ENST00000605356 973 ntBASIC5.98□□□□□ -1.45
SNX3O60493 RN7SL261P-201ENST00000613441 282 ntBASIC5.98□□□□□ -1.45
SNX3O60493 RAB28P4-201ENST00000622233 665 ntBASIC5.98□□□□□ -1.45
SNX3O60493 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.98□□□□□ -1.45
SNX3O60493 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC5.98□□□□□ -1.45
SNX3O60493 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.98□□□□□ -1.45
SNX3O60493 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SNX3O60493 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 CAP1P2-201ENST00000417455 1409 ntBASIC5.98□□□□□ -1.45
SNX3O60493 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 AC126474.2-201ENST00000623268 1750 ntBASIC5.98□□□□□ -1.45
SNX3O60493 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
SNX3O60493 AC233968.1-201ENST00000611212 1300 ntBASIC5.98□□□□□ -1.45
SNX3O60493 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.98□□□□□ -1.45
SNX3O60493 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SNX3O60493 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 AC130360.2-201ENST00000533477 1556 ntBASIC5.97□□□□□ -1.45
SNX3O60493 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
SNX3O60493 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX3O60493 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 RN7SKP145-201ENST00000363291 303 ntBASIC5.97□□□□□ -1.45
SNX3O60493 RNA5SP355-201ENST00000365317 135 ntBASIC5.97□□□□□ -1.45
SNX3O60493 PEX12P1-201ENST00000400284 1048 ntBASIC5.97□□□□□ -1.45
SNX3O60493 AL079341.1-201ENST00000404701 1207 ntBASIC5.97□□□□□ -1.45
SNX3O60493 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX3O60493 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SNX3O60493 AC242426.1-201ENST00000435270 960 ntBASIC5.97□□□□□ -1.45
SNX3O60493 AC013410.1-201ENST00000436223 1232 ntBASIC5.97□□□□□ -1.45
SNX3O60493 PRELID1P3-201ENST00000450055 643 ntBASIC5.97□□□□□ -1.45
SNX3O60493 RARRES2P3-201ENST00000457739 473 ntBASIC5.97□□□□□ -1.45
SNX3O60493 RPS16P9-201ENST00000477220 427 ntBASIC5.97□□□□□ -1.45
SNX3O60493 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.97□□□□□ -1.45
SNX3O60493 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.97□□□□□ -1.45
SNX3O60493 RN7SKP288-201ENST00000516227 268 ntBASIC5.97□□□□□ -1.45
SNX3O60493 IGHV4-55-201ENST00000520889 368 ntBASIC5.97□□□□□ -1.45
SNX3O60493 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX3O60493 AP004609.2-201ENST00000532177 190 ntBASIC5.97□□□□□ -1.45
SNX3O60493 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.97□□□□□ -1.45
SNX3O60493 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX3O60493 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.97□□□□□ -1.45
SNX3O60493 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX3O60493 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX3O60493 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.97□□□□□ -1.45
SNX3O60493 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
SNX3O60493 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX3O60493 AC092718.4-201ENST00000566639 716 ntBASIC5.97□□□□□ -1.45
SNX3O60493 AC024614.1-201ENST00000577546 307 ntBASIC5.97□□□□□ -1.45
SNX3O60493 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX3O60493 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX3O60493 AL133481.2-203ENST00000607558 139 ntBASIC5.97□□□□□ -1.45
SNX3O60493 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SNX3O60493 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX3O60493 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms