Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
EXTL3O43909 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
EXTL3O43909 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.8□□□□□ -1.32
EXTL3O43909 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.8□□□□□ -1.32
EXTL3O43909 AC110602.1-201ENST00000437414 318 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 AC016908.1-201ENST00000442571 1219 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.8□□□□□ -1.32
EXTL3O43909 HIGD1AP16-201ENST00000450986 258 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.8□□□□□ -1.32
EXTL3O43909 Z83838.1-202ENST00000456225 839 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.8□□□□□ -1.32
EXTL3O43909 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.8□□□□□ -1.32
EXTL3O43909 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.8□□□□□ -1.32
EXTL3O43909 AC022034.1-201ENST00000512867 2156 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.8□□□□□ -1.32
EXTL3O43909 NPIPB14P-203ENST00000532298 987 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 RPA2P3-201ENST00000533268 770 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.8□□□□□ -1.32
EXTL3O43909 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.8□□□□□ -1.32
EXTL3O43909 SMIM12P1-201ENST00000603004 274 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
EXTL3O43909 AP001885.1-201ENST00000621658 558 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 AC004836.1-201ENST00000623032 634 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 AL596275.2-208ENST00000641192 594 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 AC092692.1-201ENST00000623625 2595 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
EXTL3O43909 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.8□□□□□ -1.32
EXTL3O43909 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
EXTL3O43909 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
EXTL3O43909 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
EXTL3O43909 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
EXTL3O43909 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
EXTL3O43909 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
EXTL3O43909 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
EXTL3O43909 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
EXTL3O43909 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
EXTL3O43909 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
EXTL3O43909 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
EXTL3O43909 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
EXTL3O43909 AL035422.1-201ENST00000414193 397 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 AC007568.1-201ENST00000422912 471 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.79□□□□□ -1.32
EXTL3O43909 AC108479.1-201ENST00000431142 427 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.79□□□□□ -1.32
EXTL3O43909 AC069154.1-201ENST00000432914 542 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.79□□□□□ -1.32
EXTL3O43909 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.79□□□□□ -1.32
EXTL3O43909 RPS27AP3-201ENST00000453803 454 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 AC103563.5-201ENST00000455643 364 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 RN7SL221P-201ENST00000466190 281 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 RPL34P33-201ENST00000486062 334 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 MTND6P8-201ENST00000503471 522 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.79□□□□□ -1.32
EXTL3O43909 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.79□□□□□ -1.32
EXTL3O43909 HMGN1P17-201ENST00000513734 295 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 LDHBP3-201ENST00000514909 822 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.79□□□□□ -1.32
EXTL3O43909 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.79□□□□□ -1.32
EXTL3O43909 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.79□□□□□ -1.32
EXTL3O43909 AC004232.2-201ENST00000574245 821 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.79□□□□□ -1.32
EXTL3O43909 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.79□□□□□ -1.32
EXTL3O43909 NPIPB1P-202ENST00000588786 828 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.79□□□□□ -1.32
EXTL3O43909 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.79□□□□□ -1.32
EXTL3O43909 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.79□□□□□ -1.32
EXTL3O43909 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
EXTL3O43909 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
EXTL3O43909 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.79□□□□□ -1.32
EXTL3O43909 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
EXTL3O43909 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
EXTL3O43909 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
EXTL3O43909 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.78□□□□□ -1.32
EXTL3O43909 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.78□□□□□ -1.32
EXTL3O43909 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
EXTL3O43909 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms