Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.74□□□□□ -1.65
HLA-DRB4X5D2U9 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AP001157.1-201ENST00000550837 2339 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AC079753.1-201ENST00000623243 3868 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 SNORD35A-201ENST00000363389 86 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 RNA5SP85-201ENST00000365378 119 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AC090602.1-201ENST00000469695 252 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 RN7SL714P-201ENST00000487050 298 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AC009729.1-201ENST00000548873 1133 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 MIR212-201ENST00000586026 110 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 LAPTM4BP2-201ENST00000604542 446 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AL008723.3-201ENST00000608926 449 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 SAMM50P1-201ENST00000455403 1399 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 CREM-217ENST00000439705 2306 ntTSL 5 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 AC024651.2-201ENST00000562480 2098 ntBASIC4.73□□□□□ -1.65
HLA-DRB4X5D2U9 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC079248.1-201ENST00000427568 1546 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 SHQ1P1-201ENST00000437111 1544 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 RNA5SP485-201ENST00000365053 119 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL121835.1-201ENST00000404250 354 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 RN7SKP129-201ENST00000410288 299 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 RPL21P50-201ENST00000417698 477 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL360013.1-201ENST00000419031 858 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 SETP9-201ENST00000423837 832 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AC128677.1-201ENST00000436016 442 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 EMC3-AS1-205ENST00000438698 534 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL356121.1-201ENST00000442911 156 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 OR13K1P-201ENST00000444577 975 ntBASIC4.72□□□□□ -1.65
HLA-DRB4X5D2U9 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms