Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AC106800.3-201ENST00000511389 308 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 COX6B1P4-201ENST00000519826 484 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AC084337.1-201ENST00000524809 686 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 MRPS21P8-201ENST00000569196 235 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AC002310.3-201ENST00000569728 723 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AL008723.3-201ENST00000608926 449 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CLIP2Q9UDT6 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 AL050335.1-201ENST00000396909 869 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 AL590004.3-202ENST00000445883 451 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 Z83838.1-202ENST00000456225 839 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 RN7SKP248-201ENST00000516278 305 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 AL080312.2-201ENST00000613001 630 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 AL137246.2-201ENST00000613439 662 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 MIR6778-201ENST00000617912 73 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 OFD1P17-201ENST00000437639 3018 ntBASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CLIP2Q9UDT6 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 RNA5SP346-201ENST00000363541 121 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 RPL23AP18-201ENST00000416139 468 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 OR52I1-201ENST00000450052 1050 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 RN7SL326P-201ENST00000477493 296 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 OR7E99P-201ENST00000505750 922 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AP005639.1-201ENST00000526939 192 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AP005136.2-201ENST00000583253 1049 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AC079315.1-201ENST00000602952 623 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AC016590.3-201ENST00000611171 753 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 MIR1910-201ENST00000636955 80 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AC007159.1-201ENST00000566529 4706 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 AL133243.2-201ENST00000610331 1621 ntBASIC7.4□□□□□ -1.22
CLIP2Q9UDT6 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
CLIP2Q9UDT6 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.4□□□□□ -1.23
CLIP2Q9UDT6 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.4□□□□□ -1.23
CLIP2Q9UDT6 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CLIP2Q9UDT6 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms