Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 ZNF101P1-201ENST00000435701 1720 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 LINC01613-201ENST00000561476 2780 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 DNM1P47-203ENST00000571780 12667 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 PSMA6P1-201ENST00000400275 741 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 RN7SKP144-201ENST00000411108 279 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 RPS26P38-201ENST00000414476 348 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AL645936.1-201ENST00000441979 518 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 RPL34P33-201ENST00000486062 334 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC090958.1-201ENST00000511122 351 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC138517.1-201ENST00000515724 568 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC005632.2-201ENST00000564271 828 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 RN7SL261P-201ENST00000613441 282 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 AL161901.1-201ENST00000624954 3425 ntBASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS29Q9UBQ0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AL591135.1-201ENST00000401578 5914 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC022164.1-201ENST00000568767 2673 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AL096800.1-201ENST00000405326 893 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AL139805.1-201ENST00000407837 289 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 IGLV3-4-201ENST00000432300 244 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC013403.1-201ENST00000436954 263 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 OR3D1P-201ENST00000438288 955 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC064862.5-201ENST00000440618 334 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 RARRES2P3-201ENST00000457739 473 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 RPS7P10-201ENST00000464254 603 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC095052.1-201ENST00000509955 863 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 OR51A1P-201ENST00000511110 946 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 MIR132-201ENST00000591554 101 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AP001823.1-201ENST00000604056 1003 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC005899.6-201ENST00000620729 297 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC069234.4-201ENST00000621276 412 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AL138693.1-201ENST00000622219 129 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 CCAT2-201ENST00000630920 1752 ntBASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS29Q9UBQ0 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms