Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 RNU1-134P-201ENST00000362935 165 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 AL096829.1-201ENST00000413677 457 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 RPS15AP30-201ENST00000420976 390 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CISHQ9NSE2 ZNF619P1-201ENST00000446539 752 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 AC068491.1-201ENST00000449539 1241 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 RPL23AP60-201ENST00000450011 454 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 RAB28P2-201ENST00000454299 641 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 Vault.2-201ENST00000516519 98 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 AC009879.1-201ENST00000520029 839 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 FAM27E2-201ENST00000619668 403 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CISHQ9NSE2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CISHQ9NSE2 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CISHQ9NSE2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 AC022507.1-201ENST00000548349 1505 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 WBP11P1-201ENST00000562560 1931 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 RNU1-65P-201ENST00000363919 148 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 RNU105B-201ENST00000364478 208 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 AC016027.5-201ENST00000427227 210 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 RN7SL352P-201ENST00000466002 277 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 AC008945.1-201ENST00000505144 499 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 CYP4F27P-201ENST00000514557 494 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 RN7SKP35-201ENST00000517210 151 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 TPM3P3-201ENST00000521343 354 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 AC084121.1-201ENST00000533882 835 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 AC023310.2-201ENST00000553844 547 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 AL845552.1-201ENST00000556820 323 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 HSPD1P8-201ENST00000400121 1658 ntBASIC6.51□□□□□ -1.37
CISHQ9NSE2 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CISHQ9NSE2 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CISHQ9NSE2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AL022323.4-201ENST00000623980 13120 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CISHQ9NSE2 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CISHQ9NSE2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CISHQ9NSE2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 PTCD2P2-201ENST00000415579 1095 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC015977.1-201ENST00000418887 292 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AL353662.1-201ENST00000439099 327 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 FTLP8-201ENST00000446770 267 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC097463.1-201ENST00000447288 481 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC122718.2-201ENST00000505325 591 ntBASIC6.5□□□□□ -1.37
CISHQ9NSE2 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.5□□□□□ -1.37
CISHQ9NSE2 RNA5SP473-201ENST00000516402 125 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms