Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 NAP1L1P3-201ENST00000462291 880 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC008620.1-201ENST00000468453 592 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 RN7SL635P-201ENST00000492123 296 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC100823.2-201ENST00000518337 699 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 HIGD1AP18-201ENST00000520730 278 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 ST13P6-201ENST00000522430 1102 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 OR5F2P-201ENST00000532761 941 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 CSNK1A1P1-202ENST00000563423 981 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC023824.3-201ENST00000569003 562 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 CCDC58P3-201ENST00000590792 430 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC012065.3-201ENST00000602736 439 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AL078624.2-201ENST00000605063 554 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 U47924.1-201ENST00000606539 434 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC231759.1-201ENST00000616455 597 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC010435.1-201ENST00000623353 1177 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC034229.6-201ENST00000623704 224 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC138907.10-201ENST00000623708 983 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 AL139254.2-202ENST00000641937 1156 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 SUCLA2P2-201ENST00000417269 1309 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 MTCO1P18-201ENST00000455518 1419 ntBASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.18□□□□□ -1.26
TRIM55Q9BYV6 NCOA4P2-201ENST00000340589 1813 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 SF3A3P1-201ENST00000446317 1477 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AL596244.1-201ENST00000567068 3779 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 RNU4-40P-201ENST00000364351 143 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 RNA5SP302-201ENST00000364896 100 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 MIR138-2-201ENST00000384916 84 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 RNA5SP35-201ENST00000391257 129 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 HMGB1P13-201ENST00000406019 642 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 OR2X1P-201ENST00000421144 687 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 DUTP4-201ENST00000424782 475 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 SNX18P14-201ENST00000429308 574 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC105052.2-201ENST00000434317 794 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 SETP8-201ENST00000435341 628 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 CDC42P2-201ENST00000448566 569 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 OR7E62P-201ENST00000456741 477 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 HSPE1P22-201ENST00000456856 327 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 TUBBP11-201ENST00000472255 252 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC084878.1-201ENST00000480555 648 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC009153.1-201ENST00000485799 496 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 RPS4XP23-201ENST00000487801 237 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 RN7SL776P-201ENST00000493390 268 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 NDUFS5P6-201ENST00000529136 295 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC009097.3-201ENST00000563557 1018 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC008536.1-201ENST00000602872 669 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AL355333.1-201ENST00000605632 279 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 AC011374.2-201ENST00000607135 526 ntBASIC7.17□□□□□ -1.26
TRIM55Q9BYV6 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms