Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC005725.1-201ENST00000577346 2607 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 YWHAZP4-201ENST00000392459 708 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 OOSP1-201ENST00000398992 1270 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 SNORA11.5-201ENST00000408163 128 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC002127.1-201ENST00000421305 225 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 FAM183DP-201ENST00000421987 399 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AL390879.1-201ENST00000439143 386 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC079922.1-201ENST00000443291 359 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 COX4I1P2-201ENST00000447446 547 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 VPS25P1-201ENST00000455691 508 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 OR9A1P-202ENST00000484361 945 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC117500.1-201ENST00000497352 755 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC093816.1-201ENST00000515076 913 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 SNORA74.4-201ENST00000607595 199 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC099654.11-201ENST00000638857 294 ntBASIC5.89□□□□□ -1.47
COL21A1Q96P44 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL21A1Q96P44 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
COL21A1Q96P44 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 RNU11-6P-201ENST00000391127 133 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC003045.1-201ENST00000398779 713 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 PSMA6P1-201ENST00000400275 741 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 AL121835.1-201ENST00000404250 354 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 LINC00328-2P-201ENST00000436585 219 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 EMC3-AS1-205ENST00000438698 534 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 OR2L9P-201ENST00000444456 913 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 AL022319.1-201ENST00000458183 1167 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 GM2AP2-201ENST00000491764 562 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 RNA5SP400-201ENST00000517155 111 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC008055.1-201ENST00000547032 609 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 AL021368.3-201ENST00000607119 578 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 DNM1P47-203ENST00000571780 12667 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms