Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.14□□□□□ -1.27
HPS3Q969F9 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.14□□□□□ -1.27
HPS3Q969F9 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.14□□□□□ -1.27
HPS3Q969F9 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HPS3Q969F9 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HPS3Q969F9 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.14□□□□□ -1.27
HPS3Q969F9 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.14□□□□□ -1.27
HPS3Q969F9 AL445649.1-201ENST00000615941 691 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 MIR6813-201ENST00000621638 56 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 LINC00216-201ENST00000623548 1126 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 LINC02495-203ENST00000636704 242 ntBASIC7.14□□□□□ -1.27
HPS3Q969F9 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.14□□□□□ -1.27
HPS3Q969F9 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
HPS3Q969F9 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.14□□□□□ -1.27
HPS3Q969F9 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
HPS3Q969F9 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
HPS3Q969F9 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.13□□□□□ -1.27
HPS3Q969F9 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.13□□□□□ -1.27
HPS3Q969F9 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS3Q969F9 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HPS3Q969F9 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 Z93929.1-201ENST00000418200 1475 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
HPS3Q969F9 STAG3L4-201ENST00000352103 530 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
HPS3Q969F9 RNU6-1331P-201ENST00000363658 106 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AL353625.1-202ENST00000366273 571 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC7.13□□□□□ -1.27
HPS3Q969F9 AL050335.1-201ENST00000396909 869 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.13□□□□□ -1.27
HPS3Q969F9 RN7SKP221-201ENST00000410420 301 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 U3.43-201ENST00000410734 213 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 RNU2-18P-201ENST00000411224 162 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC7.13□□□□□ -1.27
HPS3Q969F9 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS3Q969F9 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.13□□□□□ -1.27
HPS3Q969F9 RPL34P27-201ENST00000428810 349 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AK3P5-201ENST00000432033 519 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 GAPDHP34-201ENST00000432112 823 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.13□□□□□ -1.27
HPS3Q969F9 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 GTF2IP14-201ENST00000441415 586 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AC092601.1-201ENST00000444526 383 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 OR52E7P-201ENST00000452394 933 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC7.13□□□□□ -1.27
HPS3Q969F9 AC016687.1-201ENST00000482574 353 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.13□□□□□ -1.27
HPS3Q969F9 SEC11B-201ENST00000518383 499 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.13□□□□□ -1.27
HPS3Q969F9 AC084851.2-201ENST00000530377 364 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AC074029.2-201ENST00000551045 634 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.13□□□□□ -1.27
HPS3Q969F9 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.13□□□□□ -1.27
HPS3Q969F9 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.13□□□□□ -1.27
HPS3Q969F9 MIR4732-201ENST00000581873 76 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.13□□□□□ -1.27
HPS3Q969F9 RPL7AP69-201ENST00000595306 806 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS3Q969F9 AC012175.1-201ENST00000603755 531 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AC024933.1-201ENST00000608472 348 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS3Q969F9 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS3Q969F9 CLUHP10-201ENST00000631979 980 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 AC106858.1-201ENST00000637497 429 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS3Q969F9 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 AC011504.1-201ENST00000623331 4103 ntBASIC7.13□□□□□ -1.27
HPS3Q969F9 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.13□□□□□ -1.27
HPS3Q969F9 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HPS3Q969F9 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.13□□□□□ -1.27
HPS3Q969F9 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.13□□□□□ -1.27
HPS3Q969F9 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
HPS3Q969F9 BX284613.1-201ENST00000452221 1641 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 AP001002.1-201ENST00000625148 1513 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 AL353743.3-201ENST00000442109 1468 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HPS3Q969F9 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HPS3Q969F9 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
HPS3Q969F9 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HPS3Q969F9 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HPS3Q969F9 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HPS3Q969F9 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HPS3Q969F9 FAM32BP-201ENST00000344033 333 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HPS3Q969F9 AMZ2P2-201ENST00000406819 1057 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 AC099535.1-201ENST00000408928 371 ntBASIC7.12□□□□□ -1.27
HPS3Q969F9 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.12□□□□□ -1.27
HPS3Q969F9 AC003989.1-201ENST00000434569 565 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms