Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 Z93929.1-201ENST00000418200 1475 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 RNA5SP350-201ENST00000363298 111 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 RN7SKP69-201ENST00000365390 305 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AC008429.4-201ENST00000521201 182 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AC092865.1-201ENST00000544395 1023 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 TPRX1P1-201ENST00000557620 319 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AC108865.2-201ENST00000606881 432 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AL080312.2-201ENST00000613001 630 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 OR7E91P-202ENST00000642062 1198 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 LINC01616-201ENST00000561816 2280 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 AL121768.1-201ENST00000613917 2544 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 VN2R1P-201ENST00000449668 1743 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 GUCY1B2-204ENST00000531898 1979 ntBASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
SHROOM3Q8TF72 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 MTND2P12-201ENST00000417560 1252 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 PPIAP10-201ENST00000438675 458 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AP002453.1-201ENST00000492327 668 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 IGKV3D-25-201ENST00000519599 235 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AL512652.1-201ENST00000619006 500 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 OR7A1P-202ENST00000641542 1158 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 NIPA2P1-201ENST00000426223 976 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AC110602.1-201ENST00000437414 318 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 EMC3-AS1-205ENST00000438698 534 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 RN7SL515P-201ENST00000463999 297 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AC114728.1-201ENST00000488289 483 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 RN7SL104P-201ENST00000498686 293 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 MTATP6P1-201ENST00000514057 681 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AL445649.1-201ENST00000615941 691 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 AC092692.1-201ENST00000623625 2595 ntBASIC6.35□□□□□ -1.39
SHROOM3Q8TF72 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 LINC02035-201ENST00000610128 5476 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 CASC19-243ENST00000641588 1546 ntBASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM3Q8TF72 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms