Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNA5SP498-201ENST00000411342 120 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC096537.2-201ENST00000413707 714 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 RPEP4-201ENST00000437636 602 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 MTND1P1-201ENST00000445453 368 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AGKP1-201ENST00000455254 1263 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 ANKRD26P4-201ENST00000455755 950 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 USP9YP25-201ENST00000457708 443 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 PSAT1P4-201ENST00000466500 526 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC044810.1-201ENST00000480271 711 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 RPS7P11-201ENST00000484240 586 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 RN7SL649P-201ENST00000496974 275 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC008967.1-201ENST00000504843 163 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC113347.3-201ENST00000509113 148 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 MRPS33P3-201ENST00000513456 322 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC027369.2-201ENST00000528030 440 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC105233.3-201ENST00000531125 744 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AP001542.2-201ENST00000593141 364 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 MTND3P19-201ENST00000603825 345 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC015819.1-201ENST00000613588 663 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AL603755.1-201ENST00000619504 163 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 LINC01808-202ENST00000641680 1116 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC004023.1-201ENST00000561473 1744 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC079178.2-201ENST00000439323 1624 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AL512310.3-201ENST00000547023 1335 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AL359263.1-201ENST00000441188 2796 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AL356361.1-201ENST00000400943 1459 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 RNU1-87P-201ENST00000363727 170 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 RN7SKP174-201ENST00000363803 330 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 SNORA68-201ENST00000384437 133 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 MIR191-201ENST00000384873 92 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AL590084.1-201ENST00000407885 387 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 TAF13P2-201ENST00000416876 286 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AL022100.1-202ENST00000421214 548 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 MTND1P20-201ENST00000430341 950 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC104698.1-201ENST00000435671 276 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AL359265.1-201ENST00000440296 795 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC123904.1-201ENST00000441072 368 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AL353093.1-201ENST00000441292 436 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC007327.1-201ENST00000447461 264 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 RPL23AP37-201ENST00000479658 549 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC005017.1-201ENST00000482002 490 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC114324.2-202ENST00000503812 134 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 AC118282.2-201ENST00000508739 374 ntBASIC7.76□□□□□ -1.17
NPAS4Q8IUM7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms