Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC007671.1-201ENST00000616957 830 ntBASIC5.76□□□□□ -1.49
SHFQ7M4L6 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHFQ7M4L6 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHFQ7M4L6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHFQ7M4L6 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHFQ7M4L6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHFQ7M4L6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SHFQ7M4L6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SHFQ7M4L6 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 QRSL1P3-201ENST00000552666 1316 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 RNU11-201ENST00000387069 134 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 MIR301B-201ENST00000390813 78 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 RPL5P20-201ENST00000403848 896 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AL590635.1-201ENST00000406314 586 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AL136100.1-201ENST00000407696 330 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 RN7SKP91-201ENST00000410852 288 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AL161742.1-201ENST00000418154 584 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 CYP4F30P-202ENST00000420048 405 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC013410.2-201ENST00000422627 201 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AJ239321.1-201ENST00000424255 564 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AHCYP8-201ENST00000425108 209 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC021876.1-201ENST00000425959 359 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC009303.1-201ENST00000426307 352 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AL590399.4-201ENST00000436561 601 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 RPS7P4-201ENST00000444127 582 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 OR13K1P-201ENST00000444577 975 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 SNRPCP3-201ENST00000474888 476 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 OR4A46P-201ENST00000527255 933 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC092451.2-201ENST00000538746 658 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AL136520.1-202ENST00000555494 763 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 FAM60CP-201ENST00000591086 664 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AL360012.1-201ENST00000602813 131 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AL049829.3-202ENST00000604278 711 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 SNORD96A-201ENST00000606577 79 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC024933.1-201ENST00000608472 348 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AL356490.1-201ENST00000623079 479 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC127071.2-201ENST00000623293 527 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC063952.1-203ENST00000634410 658 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 MSL3P1-202ENST00000440028 1468 ntBASIC5.75□□□□□ -1.49
SHFQ7M4L6 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
SHFQ7M4L6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHFQ7M4L6 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SHFQ7M4L6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHFQ7M4L6 WDR95P-201ENST00000425638 1542 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 SAGE3P-201ENST00000619800 1635 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 AOX3P-204ENST00000491025 2107 ntBASIC5.74□□□□□ -1.49
SHFQ7M4L6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms