Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
USP31Q70CQ4 OR2M1P-201ENST00000318104 951 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
USP31Q70CQ4 IGLV3-4-201ENST00000432300 244 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 CEACAMP5-201ENST00000448037 961 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 RPS26P41-201ENST00000450370 284 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 HIGD1AP16-201ENST00000450986 258 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 snoU109.3-201ENST00000459477 145 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 RN7SL714P-201ENST00000487050 298 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 AC022206.1-201ENST00000495947 347 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 SOX5P1-201ENST00000524155 1127 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USP31Q70CQ4 AC007346.1-201ENST00000569208 867 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
USP31Q70CQ4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 VN1R81P-201ENST00000602085 372 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 AC027334.1-201ENST00000603257 310 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 AP001823.1-201ENST00000604056 1003 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.61□□□□□ -1.03
USP31Q70CQ4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 AL445649.1-201ENST00000615941 691 ntBASIC8.61□□□□□ -1.03
USP31Q70CQ4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 TATDN2P3-201ENST00000452855 3665 ntBASIC8.6□□□□□ -1.03
USP31Q70CQ4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 RNU6-1257P-201ENST00000384625 110 ntBASIC8.6□□□□□ -1.03
USP31Q70CQ4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 RNF19BPX-201ENST00000426224 625 ntBASIC8.6□□□□□ -1.03
USP31Q70CQ4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 AL513321.1-201ENST00000441175 761 ntBASIC8.6□□□□□ -1.03
USP31Q70CQ4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 AC023194.2-201ENST00000465398 406 ntBASIC8.6□□□□□ -1.03
USP31Q70CQ4 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 AC090543.1-201ENST00000492168 485 ntBASIC8.6□□□□□ -1.03
USP31Q70CQ4 RNA5SP340-201ENST00000517132 107 ntBASIC8.6□□□□□ -1.03
USP31Q70CQ4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 AL121579.2-201ENST00000555466 590 ntBASIC8.6□□□□□ -1.03
USP31Q70CQ4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC8.6□□□□□ -1.03
USP31Q70CQ4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
USP31Q70CQ4 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP31Q70CQ4 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
USP31Q70CQ4 AC105114.1-201ENST00000624795 1862 ntBASIC8.59□□□□□ -1.03
USP31Q70CQ4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
USP31Q70CQ4 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.59□□□□□ -1.03
USP31Q70CQ4 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USP31Q70CQ4 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.59□□□□□ -1.03
USP31Q70CQ4 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP31Q70CQ4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.59□□□□□ -1.03
USP31Q70CQ4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.59□□□□□ -1.03
USP31Q70CQ4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
USP31Q70CQ4 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP31Q70CQ4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP31Q70CQ4 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
USP31Q70CQ4 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
USP31Q70CQ4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC8.59□□□□□ -1.03
USP31Q70CQ4 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms