Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC024255.1-201ENST00000614376 102 ntBASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC244100.4-201ENST00000617747 388 ntBASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 AC027575.3-201ENST00000583058 2747 ntBASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NHLRC1Q6VVB1 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 RNU6-1331P-201ENST00000363658 106 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 SNORD94-201ENST00000386037 137 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AC240504.1-201ENST00000395709 845 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 RN7SKP281-201ENST00000410472 352 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 RN7SKP205-201ENST00000410999 307 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 RNA5SP115-201ENST00000411160 107 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 CYP4F30P-202ENST00000420048 405 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 OR6R1P-201ENST00000431838 940 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AL355355.1-201ENST00000442900 793 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 SNX18P26-201ENST00000458433 740 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 RPS4XP17-201ENST00000479057 754 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 RPL3P13-201ENST00000550415 216 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 MIR3157-201ENST00000578688 85 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AC036176.3-201ENST00000602456 418 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AC012175.1-201ENST00000603755 531 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AL138960.1-201ENST00000613838 513 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AC011815.2-201ENST00000618230 2021 ntBASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.72□□□□□ -1.49
NHLRC1Q6VVB1 NCOA4P2-201ENST00000340589 1813 ntBASIC5.71□□□□□ -1.49
NHLRC1Q6VVB1 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
NHLRC1Q6VVB1 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC011503.2-201ENST00000594230 1500 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 CDY17P-201ENST00000414121 1282 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 PRUNEP1-201ENST00000425846 705 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 CDY8P-201ENST00000428380 1279 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC064862.5-201ENST00000440618 334 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 PA2G4P1-201ENST00000442248 1197 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 CDY20P-201ENST00000447528 1279 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AL445991.1-201ENST00000450381 475 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 RFPL4AP3-201ENST00000515267 345 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 IGKV1D-22-201ENST00000518953 324 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AP001804.1-201ENST00000526868 919 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 OR4A42P-201ENST00000531397 938 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AL008723.3-201ENST00000608926 449 ntBASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 AL132640.3-201ENST00000630473 177 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms