Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTR9Q6PD62 PARP4P1-201ENST00000435945 2337 ntBASIC7.49□□□□□ -1.21
CTR9Q6PD62 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 FGG-201ENST00000336098 1659 ntTSL 2 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 GUCY1B2-204ENST00000531898 1979 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 OR5W1P-201ENST00000423705 938 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 PCNPP2-201ENST00000441651 455 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 MAST4-IT1-201ENST00000514241 658 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 RN7SKP70-201ENST00000516655 271 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 NATP-201ENST00000523491 878 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 MRPS21P8-201ENST00000569196 235 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 AL591167.1-201ENST00000607321 456 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 AC010998.3-201ENST00000613871 631 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 MIR7159-201ENST00000620587 66 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 AL731556.1-201ENST00000394628 3711 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 BX284613.1-201ENST00000452221 1641 ntBASIC7.48□□□□□ -1.21
CTR9Q6PD62 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.48□□□□□ -1.21
CTR9Q6PD62 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CTR9Q6PD62 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC110373.1-201ENST00000505994 3505 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC010168.2-201ENST00000562691 5428 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTR9Q6PD62 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 RNA5SP350-201ENST00000363298 111 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 RNA5SP333-201ENST00000363466 118 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 RNA5SP334-201ENST00000364825 118 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 RNA5SP115-201ENST00000411160 107 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 RPL7AP14-201ENST00000424041 802 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 MORF4-201ENST00000447135 971 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 VN1R38P-201ENST00000450265 887 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 HIGD1AP16-201ENST00000450986 258 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AP002453.1-201ENST00000492327 668 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC010343.2-201ENST00000510162 224 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 RN7SKP67-201ENST00000515905 235 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC009879.1-201ENST00000520029 839 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC009120.3-201ENST00000563335 499 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CTR9Q6PD62 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC016590.3-201ENST00000611171 753 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AL445649.1-201ENST00000615941 691 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTR9Q6PD62 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 AL592429.1-201ENST00000403909 1473 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 AC104966.1-201ENST00000467010 1464 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 OLMALINC-203ENST00000641087 3779 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTR9Q6PD62 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 EIF3EP1-201ENST00000433978 1316 ntBASIC7.47□□□□□ -1.21
CTR9Q6PD62 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTR9Q6PD62 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.47□□□□□ -1.21
CTR9Q6PD62 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CTR9Q6PD62 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.46□□□□□ -1.21
CTR9Q6PD62 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CTR9Q6PD62 AC137056.2-201ENST00000624055 1958 ntBASIC7.46□□□□□ -1.21
CTR9Q6PD62 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms