Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 HMGB3P19-201ENST00000403971 560 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 RNU4-27P-201ENST00000410889 139 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 AL355862.1-201ENST00000412705 353 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 NIFKP3-201ENST00000417799 865 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 MTCO1P52-201ENST00000433928 531 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC073052.1-201ENST00000440417 714 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 RHEBP1-201ENST00000448647 556 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 AL390728.3-201ENST00000452704 270 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 C1DP3-201ENST00000455013 423 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 RPL21P18-201ENST00000469899 480 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 RPS4XP17-201ENST00000479057 754 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 RN7SL153P-201ENST00000486501 292 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC091951.3-201ENST00000504093 246 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC114940.1-201ENST00000512162 1265 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 EGLN3P1-201ENST00000541727 720 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AL109628.1-201ENST00000556877 366 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC005070.2-201ENST00000604391 260 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC012640.3-201ENST00000607847 430 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 MIR6780B-201ENST00000610307 79 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 PART1_2.1-201ENST00000612397 250 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC010435.1-201ENST00000623353 1177 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC092656.1-203ENST00000624134 423 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC073488.7-201ENST00000633785 778 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC068137.3-201ENST00000639191 341 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC073869.6-201ENST00000640656 341 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 OR11H2-202ENST00000641517 1085 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC126773.4-201ENST00000612545 3043 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 AC022819.1-201ENST00000563495 3910 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.61□□□□□ -1.19
RNF43Q68DV7 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.61□□□□□ -1.19
RNF43Q68DV7 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
RNF43Q68DV7 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF43Q68DV7 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF43Q68DV7 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF43Q68DV7 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 MTND4P23-201ENST00000447723 1363 ntBASIC7.6□□□□□ -1.19
RNF43Q68DV7 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 SPATA31C2-201ENST00000324915 3777 ntBASIC7.6□□□□□ -1.19
RNF43Q68DV7 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RNF43Q68DV7 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF43Q68DV7 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF43Q68DV7 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 ANKRD36P1-201ENST00000344424 659 ntBASIC7.6□□□□□ -1.19
RNF43Q68DV7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 RNU5B-4P-201ENST00000363508 111 ntBASIC7.6□□□□□ -1.19
RNF43Q68DV7 RNU6-618P-201ENST00000363518 112 ntBASIC7.6□□□□□ -1.19
RNF43Q68DV7 U3.14-201ENST00000365363 227 ntBASIC7.6□□□□□ -1.19
RNF43Q68DV7 RNA5SP238-201ENST00000365464 120 ntBASIC7.6□□□□□ -1.19
RNF43Q68DV7 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RNF43Q68DV7 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 CYP4F34P-201ENST00000425951 481 ntBASIC7.6□□□□□ -1.19
RNF43Q68DV7 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.6□□□□□ -1.19
RNF43Q68DV7 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms