Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 MIR4271-201ENST00000582451 67 ntBASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 AL445528.2-201ENST00000620582 470 ntBASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 AL445984.1-201ENST00000637834 659 ntBASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 DLEU2L-201ENST00000371086 3555 ntBASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 NBPF8-201ENST00000583271 5330 ntBASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.81□□□□□ -1.16
CCDC144BQ3MJ40 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AL512329.1-201ENST00000404600 1592 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 RNA5SP512-201ENST00000364550 120 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 TAF9BP2-201ENST00000400856 499 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 TATDN1P1-201ENST00000414123 891 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AL606495.1-201ENST00000422100 813 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 TIMM8BP2-201ENST00000445940 251 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 HMGN1P5-201ENST00000448591 263 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AKR1D1P1-201ENST00000457236 936 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AC026826.1-201ENST00000493002 361 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 RNU6-415P-201ENST00000516252 97 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 RN7SKP70-201ENST00000516655 271 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AC025918.2-201ENST00000558683 763 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 RPL29P33-201ENST00000587474 316 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AP001033.2-201ENST00000609701 1003 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AC004801.6-201ENST00000616571 978 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 AC022034.1-201ENST00000512867 2156 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 WBP11P1-201ENST00000562560 1931 ntBASIC7.8□□□□□ -1.16
CCDC144BQ3MJ40 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 AC083806.2-201ENST00000617795 2685 ntBASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 OR2AH1P-202ENST00000641232 2744 ntBASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
CCDC144BQ3MJ40 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms