Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RPS27P20-201ENST00000492051 246 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 RN7SL362P-201ENST00000494228 267 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 ZNF519P4-201ENST00000514008 125 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.59□□□□□ -1.51
H3F3AP84243 AP001804.1-201ENST00000526868 919 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.59□□□□□ -1.51
H3F3AP84243 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.59□□□□□ -1.51
H3F3AP84243 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.59□□□□□ -1.51
H3F3AP84243 AC027229.1-201ENST00000583887 253 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.59□□□□□ -1.51
H3F3AP84243 uc_338.29-201ENST00000615099 168 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.59□□□□□ -1.51
H3F3AP84243 AC004836.1-201ENST00000623032 634 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 AP001153.1-201ENST00000641024 338 ntBASIC5.59□□□□□ -1.51
H3F3AP84243 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3AP84243 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.59□□□□□ -1.51
H3F3AP84243 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3AP84243 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3AP84243 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.59□□□□□ -1.51
H3F3AP84243 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3F3AP84243 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
H3F3AP84243 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
H3F3AP84243 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.59□□□□□ -1.52
H3F3AP84243 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
H3F3AP84243 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
H3F3AP84243 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.52
H3F3AP84243 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
H3F3AP84243 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
H3F3AP84243 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3F3AP84243 IMMTP1-201ENST00000435590 2219 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AC006511.3-201ENST00000624929 1783 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.58□□□□□ -1.52
H3F3AP84243 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3F3AP84243 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
H3F3AP84243 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3F3AP84243 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
H3F3AP84243 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.58□□□□□ -1.52
H3F3AP84243 AC007568.1-201ENST00000422912 471 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.58□□□□□ -1.52
H3F3AP84243 AC096632.2-201ENST00000438139 1239 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AL590004.3-202ENST00000445883 451 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.58□□□□□ -1.52
H3F3AP84243 RN7SL221P-201ENST00000466190 281 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AL117692.1-201ENST00000494283 713 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 SNX18P24-201ENST00000505249 671 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 OR6M2P-201ENST00000529831 871 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.58□□□□□ -1.52
H3F3AP84243 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.58□□□□□ -1.52
H3F3AP84243 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.58□□□□□ -1.52
H3F3AP84243 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.58□□□□□ -1.52
H3F3AP84243 NPIPB1P-202ENST00000588786 828 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.58□□□□□ -1.52
H3F3AP84243 AL021368.3-201ENST00000607119 578 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AL135999.3-201ENST00000610501 812 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AL080312.2-201ENST00000613001 630 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AL031658.2-201ENST00000616850 651 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.58□□□□□ -1.52
H3F3AP84243 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.58□□□□□ -1.52
H3F3AP84243 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
H3F3AP84243 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3F3AP84243 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3F3AP84243 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3F3AP84243 AL359976.1-201ENST00000418655 3528 ntBASIC5.58□□□□□ -1.52
H3F3AP84243 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.58□□□□□ -1.52
H3F3AP84243 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.58□□□□□ -1.52
H3F3AP84243 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.58□□□□□ -1.52
H3F3AP84243 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3F3AP84243 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
H3F3AP84243 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.58□□□□□ -1.52
H3F3AP84243 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
H3F3AP84243 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
H3F3AP84243 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 AC096921.2-201ENST00000561507 1916 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 AP001541.1-201ENST00000623322 1904 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
H3F3AP84243 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
H3F3AP84243 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.57□□□□□ -1.52
H3F3AP84243 RNU6-316P-201ENST00000391027 107 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 RN7SKP86-201ENST00000410454 332 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 RN7SKP108-201ENST00000411367 328 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 TMA16P2-201ENST00000413187 601 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 AL359885.1-201ENST00000415786 903 ntBASIC5.57□□□□□ -1.52
H3F3AP84243 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.57□□□□□ -1.52
H3F3AP84243 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.57□□□□□ -1.52
H3F3AP84243 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.57□□□□□ -1.52
H3F3AP84243 AL645936.1-201ENST00000441979 518 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms