Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.47□□□□□ -1.53
UBA52P62987 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.47□□□□□ -1.53
UBA52P62987 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AC006328.2-201ENST00000623198 397 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AC012005.2-201ENST00000624333 397 ntBASIC5.47□□□□□ -1.53
UBA52P62987 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 MIR1910-201ENST00000636955 80 ntBASIC5.47□□□□□ -1.53
UBA52P62987 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
UBA52P62987 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
UBA52P62987 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 Z97989.1-201ENST00000531702 2421 ntBASIC5.47□□□□□ -1.53
UBA52P62987 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 MTCO1P25-201ENST00000414449 1799 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AC022613.3-201ENST00000560740 1346 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.46□□□□□ -1.53
UBA52P62987 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
UBA52P62987 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
UBA52P62987 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
UBA52P62987 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.46□□□□□ -1.53
UBA52P62987 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
UBA52P62987 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
UBA52P62987 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 MIR133A2-201ENST00000347538 102 ntBASIC5.46□□□□□ -1.54
UBA52P62987 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
UBA52P62987 AL391419.1-201ENST00000398901 1275 ntBASIC5.46□□□□□ -1.54
UBA52P62987 PRELID1P1-201ENST00000403549 660 ntBASIC5.46□□□□□ -1.54
UBA52P62987 AL121835.1-201ENST00000404250 354 ntBASIC5.46□□□□□ -1.54
UBA52P62987 AL023284.3-201ENST00000407767 334 ntBASIC5.46□□□□□ -1.54
UBA52P62987 RN7SKP129-201ENST00000410288 299 ntBASIC5.46□□□□□ -1.54
UBA52P62987 AC092651.1-201ENST00000426110 312 ntBASIC5.46□□□□□ -1.54
UBA52P62987 AL590399.2-201ENST00000427536 309 ntBASIC5.46□□□□□ -1.54
UBA52P62987 AL590128.1-201ENST00000433407 286 ntBASIC5.46□□□□□ -1.54
UBA52P62987 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.46□□□□□ -1.54
UBA52P62987 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.46□□□□□ -1.54
UBA52P62987 AC144530.1-201ENST00000452862 555 ntBASIC5.46□□□□□ -1.54
UBA52P62987 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.46□□□□□ -1.54
UBA52P62987 AC113367.2-201ENST00000505749 160 ntBASIC5.46□□□□□ -1.54
UBA52P62987 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
UBA52P62987 SNX18P23-201ENST00000510867 677 ntBASIC5.46□□□□□ -1.54
UBA52P62987 AC026774.2-201ENST00000513990 1098 ntBASIC5.46□□□□□ -1.54
UBA52P62987 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.46□□□□□ -1.54
UBA52P62987 SNRPCP6-201ENST00000528310 210 ntBASIC5.46□□□□□ -1.54
UBA52P62987 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.46□□□□□ -1.54
UBA52P62987 AC073916.1-201ENST00000545095 130 ntBASIC5.46□□□□□ -1.54
UBA52P62987 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.46□□□□□ -1.54
UBA52P62987 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.46□□□□□ -1.54
UBA52P62987 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
UBA52P62987 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.46□□□□□ -1.54
UBA52P62987 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.46□□□□□ -1.54
UBA52P62987 AC097641.3-201ENST00000613523 464 ntBASIC5.46□□□□□ -1.54
UBA52P62987 AC004241.2-201ENST00000614562 444 ntBASIC5.46□□□□□ -1.54
UBA52P62987 AC111152.1-202ENST00000635848 339 ntBASIC5.46□□□□□ -1.54
UBA52P62987 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 AC062022.1-201ENST00000451026 1684 ntBASIC5.46□□□□□ -1.54
UBA52P62987 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UBA52P62987 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
UBA52P62987 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.45□□□□□ -1.54
UBA52P62987 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
UBA52P62987 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBA52P62987 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
UBA52P62987 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBA52P62987 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
UBA52P62987 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UBA52P62987 RNA5SP140-201ENST00000364524 92 ntBASIC5.45□□□□□ -1.54
UBA52P62987 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.45□□□□□ -1.54
UBA52P62987 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
UBA52P62987 AL590635.1-201ENST00000406314 586 ntBASIC5.45□□□□□ -1.54
UBA52P62987 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.45□□□□□ -1.54
UBA52P62987 GAPDHP57-201ENST00000424400 585 ntBASIC5.45□□□□□ -1.54
UBA52P62987 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.45□□□□□ -1.54
UBA52P62987 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.45□□□□□ -1.54
UBA52P62987 KCTD9P1-201ENST00000430462 1167 ntBASIC5.45□□□□□ -1.54
UBA52P62987 RPL12P16-201ENST00000431098 498 ntBASIC5.45□□□□□ -1.54
UBA52P62987 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.45□□□□□ -1.54
UBA52P62987 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.45□□□□□ -1.54
UBA52P62987 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.45□□□□□ -1.54
UBA52P62987 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.45□□□□□ -1.54
UBA52P62987 AC079922.1-201ENST00000443291 359 ntBASIC5.45□□□□□ -1.54
UBA52P62987 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.45□□□□□ -1.54
UBA52P62987 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.45□□□□□ -1.54
UBA52P62987 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms