Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.77□□□□□ -1.33
COPAP53621 AC104339.1-201ENST00000465478 348 ntBASIC6.77□□□□□ -1.33
COPAP53621 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.77□□□□□ -1.33
COPAP53621 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.77□□□□□ -1.33
COPAP53621 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.77□□□□□ -1.33
COPAP53621 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.77□□□□□ -1.33
COPAP53621 OR52H2P-201ENST00000514607 902 ntBASIC6.77□□□□□ -1.33
COPAP53621 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.77□□□□□ -1.33
COPAP53621 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.77□□□□□ -1.33
COPAP53621 AC092451.2-201ENST00000538746 658 ntBASIC6.77□□□□□ -1.33
COPAP53621 AC009729.1-201ENST00000548873 1133 ntBASIC6.77□□□□□ -1.33
COPAP53621 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.77□□□□□ -1.33
COPAP53621 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.77□□□□□ -1.33
COPAP53621 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.77□□□□□ -1.33
COPAP53621 AL391001.1-201ENST00000602747 715 ntBASIC6.77□□□□□ -1.33
COPAP53621 SNORD96A-201ENST00000606577 79 ntBASIC6.77□□□□□ -1.33
COPAP53621 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 AL590410.1-201ENST00000617925 333 ntBASIC6.77□□□□□ -1.33
COPAP53621 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.77□□□□□ -1.33
COPAP53621 MTND4P21-201ENST00000453886 1357 ntBASIC6.77□□□□□ -1.33
COPAP53621 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 ZNF402P-201ENST00000404435 3100 ntBASIC6.77□□□□□ -1.33
COPAP53621 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
COPAP53621 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COPAP53621 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
COPAP53621 RACGAP1P-201ENST00000550663 1879 ntBASIC6.77□□□□□ -1.33
COPAP53621 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COPAP53621 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 AC025809.2-201ENST00000625085 1802 ntBASIC6.76□□□□□ -1.33
COPAP53621 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPAP53621 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COPAP53621 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COPAP53621 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPAP53621 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPAP53621 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
COPAP53621 VN1R12P-201ENST00000403778 876 ntBASIC6.76□□□□□ -1.33
COPAP53621 SNORA11.3-201ENST00000408471 128 ntBASIC6.76□□□□□ -1.33
COPAP53621 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.76□□□□□ -1.33
COPAP53621 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 AL390879.2-203ENST00000426943 1121 ntBASIC6.76□□□□□ -1.33
COPAP53621 AL645939.3-201ENST00000435408 225 ntBASIC6.76□□□□□ -1.33
COPAP53621 GAPDHP33-201ENST00000443168 1013 ntBASIC6.76□□□□□ -1.33
COPAP53621 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 SNORA26.10-201ENST00000516427 141 ntBASIC6.76□□□□□ -1.33
COPAP53621 RN7SKP70-201ENST00000516655 271 ntBASIC6.76□□□□□ -1.33
COPAP53621 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 OR52K3P-201ENST00000531655 943 ntBASIC6.76□□□□□ -1.33
COPAP53621 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.76□□□□□ -1.33
COPAP53621 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.76□□□□□ -1.33
COPAP53621 AC012414.2-201ENST00000559474 187 ntBASIC6.76□□□□□ -1.33
COPAP53621 OR1E3-201ENST00000575608 948 ntBASIC6.76□□□□□ -1.33
COPAP53621 MTND2P13-201ENST00000577438 1039 ntBASIC6.76□□□□□ -1.33
COPAP53621 MIR4271-201ENST00000582451 67 ntBASIC6.76□□□□□ -1.33
COPAP53621 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 AC026790.2-201ENST00000606282 430 ntBASIC6.76□□□□□ -1.33
COPAP53621 SNORA11.6-201ENST00000619030 128 ntBASIC6.76□□□□□ -1.33
COPAP53621 OR1N1-202ENST00000619659 939 ntBASIC6.76□□□□□ -1.33
COPAP53621 AL683826.1-201ENST00000624104 627 ntBASIC6.76□□□□□ -1.33
COPAP53621 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPAP53621 AC114876.1-201ENST00000490962 1366 ntBASIC6.76□□□□□ -1.33
COPAP53621 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.76□□□□□ -1.33
COPAP53621 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COPAP53621 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COPAP53621 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
COPAP53621 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COPAP53621 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COPAP53621 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.75□□□□□ -1.33
COPAP53621 NAMPTP1-201ENST00000440465 2514 ntBASIC6.75□□□□□ -1.33
COPAP53621 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COPAP53621 PARP4P1-201ENST00000435945 2337 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms