Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 RN7SKP124-201ENST00000364730 341 ntBASIC7.5□□□□□ -1.21
NUP98P52948 MIR143-201ENST00000385300 106 ntBASIC7.5□□□□□ -1.21
NUP98P52948 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
NUP98P52948 PTCD2P2-201ENST00000415579 1095 ntBASIC7.5□□□□□ -1.21
NUP98P52948 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.5□□□□□ -1.21
NUP98P52948 RPS27AP2-201ENST00000457576 465 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.5□□□□□ -1.21
NUP98P52948 RPS3AP15-201ENST00000483874 781 ntBASIC7.5□□□□□ -1.21
NUP98P52948 IGLV3-30-201ENST00000524362 298 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.5□□□□□ -1.21
NUP98P52948 AC007225.2-201ENST00000562529 256 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.5□□□□□ -1.21
NUP98P52948 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.5□□□□□ -1.21
NUP98P52948 MIR4776-2-201ENST00000580204 80 ntBASIC7.5□□□□□ -1.21
NUP98P52948 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.5□□□□□ -1.21
NUP98P52948 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.5□□□□□ -1.21
NUP98P52948 AC087269.2-201ENST00000641764 975 ntBASIC7.5□□□□□ -1.21
NUP98P52948 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
NUP98P52948 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NUP98P52948 AL391261.1-201ENST00000555712 1479 ntBASIC7.49□□□□□ -1.21
NUP98P52948 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
NUP98P52948 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.49□□□□□ -1.21
NUP98P52948 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.49□□□□□ -1.21
NUP98P52948 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC7.49□□□□□ -1.21
NUP98P52948 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.49□□□□□ -1.21
NUP98P52948 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NUP98P52948 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.49□□□□□ -1.21
NUP98P52948 RPL36AP39-201ENST00000445859 318 ntBASIC7.49□□□□□ -1.21
NUP98P52948 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.49□□□□□ -1.21
NUP98P52948 AL022319.1-201ENST00000458183 1167 ntBASIC7.49□□□□□ -1.21
NUP98P52948 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.49□□□□□ -1.21
NUP98P52948 AC016180.1-201ENST00000567945 403 ntBASIC7.49□□□□□ -1.21
NUP98P52948 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.49□□□□□ -1.21
NUP98P52948 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 AOX3P-204ENST00000491025 2107 ntBASIC7.49□□□□□ -1.21
NUP98P52948 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NUP98P52948 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 RNA5SP394-201ENST00000364216 119 ntBASIC7.48□□□□□ -1.21
NUP98P52948 RNA5SP132-201ENST00000364725 118 ntBASIC7.48□□□□□ -1.21
NUP98P52948 RN7SKP29-201ENST00000410957 272 ntBASIC7.48□□□□□ -1.21
NUP98P52948 DPPA2P3-201ENST00000411853 655 ntBASIC7.48□□□□□ -1.21
NUP98P52948 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.48□□□□□ -1.21
NUP98P52948 AC011742.2-201ENST00000443818 352 ntBASIC7.48□□□□□ -1.21
NUP98P52948 AC103563.5-201ENST00000455643 364 ntBASIC7.48□□□□□ -1.21
NUP98P52948 AC011225.1-201ENST00000457751 369 ntBASIC7.48□□□□□ -1.21
NUP98P52948 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 AC138866.2-201ENST00000508650 584 ntBASIC7.48□□□□□ -1.21
NUP98P52948 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC7.48□□□□□ -1.21
NUP98P52948 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 AC130360.2-201ENST00000533477 1556 ntBASIC7.48□□□□□ -1.21
NUP98P52948 RARSP1-201ENST00000542842 1418 ntBASIC7.48□□□□□ -1.21
NUP98P52948 AL391262.1-201ENST00000556558 1992 ntBASIC7.48□□□□□ -1.21
NUP98P52948 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NUP98P52948 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.48□□□□□ -1.21
NUP98P52948 AC105749.1-201ENST00000631338 2008 ntBASIC7.48□□□□□ -1.21
NUP98P52948 OR11H2-202ENST00000641517 1085 ntBASIC7.48□□□□□ -1.21
NUP98P52948 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
NUP98P52948 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUP98P52948 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
NUP98P52948 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.48□□□□□ -1.21
NUP98P52948 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
NUP98P52948 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUP98P52948 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
NUP98P52948 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NUP98P52948 AC113412.1-201ENST00000425840 504 ntBASIC7.48□□□□□ -1.21
NUP98P52948 COPS8P2-201ENST00000473228 627 ntBASIC7.48□□□□□ -1.21
NUP98P52948 AC083795.1-201ENST00000491760 320 ntBASIC7.48□□□□□ -1.21
NUP98P52948 RNU6-615P-201ENST00000516065 106 ntBASIC7.48□□□□□ -1.21
NUP98P52948 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NUP98P52948 CU639417.4-201ENST00000623928 207 ntBASIC7.48□□□□□ -1.21
NUP98P52948 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.48□□□□□ -1.21
NUP98P52948 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.47□□□□□ -1.21
NUP98P52948 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.47□□□□□ -1.21
NUP98P52948 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
NUP98P52948 PARP4P2-201ENST00000446672 3326 ntBASIC7.47□□□□□ -1.21
NUP98P52948 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 AC112243.1-201ENST00000623949 3851 ntBASIC7.47□□□□□ -1.21
NUP98P52948 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.47□□□□□ -1.21
NUP98P52948 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
NUP98P52948 OR6E1P-201ENST00000414424 923 ntBASIC7.47□□□□□ -1.21
NUP98P52948 AC099677.3-201ENST00000427081 395 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms