Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
PDX1P52945 AC093225.1-201ENST00000506867 1408 ntBASIC6.16□□□□□ -1.42
PDX1P52945 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.16□□□□□ -1.42
PDX1P52945 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDX1P52945 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
PDX1P52945 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.15□□□□□ -1.42
PDX1P52945 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.15□□□□□ -1.42
PDX1P52945 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.42
PDX1P52945 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 SAGE3P-201ENST00000619800 1635 ntBASIC6.15□□□□□ -1.42
PDX1P52945 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.15□□□□□ -1.42
PDX1P52945 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.15□□□□□ -1.42
PDX1P52945 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 SNORA11B-201ENST00000408175 129 ntBASIC6.15□□□□□ -1.42
PDX1P52945 HMGN1P20-201ENST00000411849 300 ntBASIC6.15□□□□□ -1.42
PDX1P52945 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.15□□□□□ -1.42
PDX1P52945 RPS3P2-201ENST00000421346 701 ntBASIC6.15□□□□□ -1.42
PDX1P52945 RPL7AP14-201ENST00000424041 802 ntBASIC6.15□□□□□ -1.42
PDX1P52945 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.15□□□□□ -1.42
PDX1P52945 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.15□□□□□ -1.42
PDX1P52945 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.15□□□□□ -1.42
PDX1P52945 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.15□□□□□ -1.42
PDX1P52945 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.15□□□□□ -1.42
PDX1P52945 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.15□□□□□ -1.42
PDX1P52945 PPIAP27-201ENST00000453800 265 ntBASIC6.15□□□□□ -1.42
PDX1P52945 HLA-DPA3-207ENST00000454398 229 ntBASIC6.15□□□□□ -1.42
PDX1P52945 SETP20-201ENST00000457046 852 ntBASIC6.15□□□□□ -1.42
PDX1P52945 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 RN7SL369P-201ENST00000477138 299 ntBASIC6.15□□□□□ -1.42
PDX1P52945 RPL7P51-201ENST00000490532 749 ntBASIC6.15□□□□□ -1.42
PDX1P52945 AC025458.1-201ENST00000506046 166 ntBASIC6.15□□□□□ -1.42
PDX1P52945 AC095052.1-201ENST00000509955 863 ntBASIC6.15□□□□□ -1.42
PDX1P52945 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.15□□□□□ -1.42
PDX1P52945 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.15□□□□□ -1.42
PDX1P52945 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.15□□□□□ -1.42
PDX1P52945 AC079905.1-201ENST00000549280 475 ntBASIC6.15□□□□□ -1.42
PDX1P52945 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.15□□□□□ -1.42
PDX1P52945 TPRX1P1-201ENST00000557620 319 ntBASIC6.15□□□□□ -1.42
PDX1P52945 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDX1P52945 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
PDX1P52945 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.15□□□□□ -1.42
PDX1P52945 MIR3614-201ENST00000581261 86 ntBASIC6.15□□□□□ -1.42
PDX1P52945 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.15□□□□□ -1.42
PDX1P52945 AC073389.3-201ENST00000609434 935 ntBASIC6.15□□□□□ -1.42
PDX1P52945 AC079414.3-201ENST00000612986 1090 ntBASIC6.15□□□□□ -1.42
PDX1P52945 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.15□□□□□ -1.42
PDX1P52945 FO681491.1-202ENST00000623392 737 ntBASIC6.15□□□□□ -1.42
PDX1P52945 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.15□□□□□ -1.42
PDX1P52945 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PDX1P52945 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.15□□□□□ -1.43
PDX1P52945 AC027575.3-201ENST00000583058 2747 ntBASIC6.15□□□□□ -1.43
PDX1P52945 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.15□□□□□ -1.43
PDX1P52945 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDX1P52945 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDX1P52945 AL354854.1-201ENST00000455940 1363 ntBASIC6.15□□□□□ -1.43
PDX1P52945 AL136984.1-201ENST00000607611 1893 ntBASIC6.15□□□□□ -1.43
PDX1P52945 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PDX1P52945 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 AC007114.2-201ENST00000576014 4281 ntBASIC6.14□□□□□ -1.43
PDX1P52945 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.14□□□□□ -1.43
PDX1P52945 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.14□□□□□ -1.43
PDX1P52945 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 RNA5SP333-201ENST00000363466 118 ntBASIC6.14□□□□□ -1.43
PDX1P52945 RNA5SP334-201ENST00000364825 118 ntBASIC6.14□□□□□ -1.43
PDX1P52945 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PDX1P52945 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 RNU1-46P-201ENST00000384425 164 ntBASIC6.14□□□□□ -1.43
PDX1P52945 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.14□□□□□ -1.43
PDX1P52945 Z68868.1-201ENST00000429048 544 ntBASIC6.14□□□□□ -1.43
PDX1P52945 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDX1P52945 SOCS5P1-201ENST00000440415 949 ntBASIC6.14□□□□□ -1.43
PDX1P52945 AL391987.1-201ENST00000441025 200 ntBASIC6.14□□□□□ -1.43
PDX1P52945 AC073109.1-201ENST00000445066 978 ntBASIC6.14□□□□□ -1.43
PDX1P52945 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms