Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AF131215.2-201ENST00000531549 1710 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA2P51531 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA2P51531 HDAC1P2-201ENST00000453661 1398 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA2P51531 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
SMARCA2P51531 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA2P51531 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA2P51531 RPL37P18-201ENST00000411602 243 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC10.69□□□□□ -0.7
SMARCA2P51531 AL355032.1-201ENST00000472981 438 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 SUMO2P7-201ENST00000511179 285 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 AC253576.1-201ENST00000511645 1156 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 AC096996.1-201ENST00000563813 325 ntBASIC10.69□□□□□ -0.7
SMARCA2P51531 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SMARCA2P51531 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC10.68□□□□□ -0.7
SMARCA2P51531 AC025470.1-201ENST00000510053 2032 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SMARCA2P51531 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC10.68□□□□□ -0.7
SMARCA2P51531 AL359976.1-201ENST00000418655 3528 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC10.68□□□□□ -0.7
SMARCA2P51531 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC10.68□□□□□ -0.7
SMARCA2P51531 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
SMARCA2P51531 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
SMARCA2P51531 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 AL606490.8-201ENST00000441624 319 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 EEF1B2P5-201ENST00000444820 548 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 AL450996.1-201ENST00000445574 1202 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 AL157777.1-201ENST00000468100 304 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 AC100832.1-201ENST00000471945 383 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC10.68□□□□□ -0.7
SMARCA2P51531 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC10.68□□□□□ -0.7
SMARCA2P51531 HMGB1P42-201ENST00000532126 553 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC10.68□□□□□ -0.7
SMARCA2P51531 HMGN2P6-201ENST00000551091 273 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC10.68□□□□□ -0.7
SMARCA2P51531 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 FKBP1AP1-201ENST00000594588 318 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC10.68□□□□□ -0.7
SMARCA2P51531 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC10.68□□□□□ -0.7
SMARCA2P51531 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SMARCA2P51531 MAPK10-323ENST00000641493 3207 ntBASIC10.68□□□□□ -0.7
SMARCA2P51531 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SMARCA2P51531 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA2P51531 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA2P51531 CASC19-248ENST00000641674 1356 ntBASIC10.67□□□□□ -0.7
SMARCA2P51531 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA2P51531 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC10.67□□□□□ -0.7
SMARCA2P51531 AL355377.1-201ENST00000621125 1653 ntBASIC10.67□□□□□ -0.7
SMARCA2P51531 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA2P51531 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SMARCA2P51531 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA2P51531 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC10.67□□□□□ -0.7
SMARCA2P51531 MRPL53P1-201ENST00000414323 319 ntBASIC10.67□□□□□ -0.7
SMARCA2P51531 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC10.67□□□□□ -0.7
SMARCA2P51531 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC10.67□□□□□ -0.7
SMARCA2P51531 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC10.67□□□□□ -0.7
SMARCA2P51531 RPS27AP3-201ENST00000453803 454 ntBASIC10.67□□□□□ -0.7
SMARCA2P51531 FRG2FP-204ENST00000453982 852 ntBASIC10.67□□□□□ -0.7
SMARCA2P51531 MRPS16P1-201ENST00000523462 412 ntBASIC10.67□□□□□ -0.7
SMARCA2P51531 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SMARCA2P51531 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC10.67□□□□□ -0.7
SMARCA2P51531 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC10.67□□□□□ -0.7
SMARCA2P51531 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC10.67□□□□□ -0.7
SMARCA2P51531 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SMARCA2P51531 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA2P51531 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA2P51531 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SMARCA2P51531 AL023806.3-201ENST00000638502 2704 ntBASIC10.67□□□□□ -0.7
SMARCA2P51531 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 YES1P1-201ENST00000418510 1628 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC10.66□□□□□ -0.7
SMARCA2P51531 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC10.66□□□□□ -0.7
SMARCA2P51531 CTNNA1P1-201ENST00000515849 2728 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 AC016583.1-201ENST00000624221 2431 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC10.66□□□□□ -0.7
SMARCA2P51531 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 RNA5SP350-201ENST00000363298 111 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 SNRPEP6-201ENST00000407465 277 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 HMGB1P32-201ENST00000425971 565 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC10.66□□□□□ -0.7
SMARCA2P51531 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC10.66□□□□□ -0.7
SMARCA2P51531 CBX1P5-201ENST00000475330 559 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 RN7SL808P-201ENST00000496066 299 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 IGLV3-30-201ENST00000524362 298 ntBASIC10.66□□□□□ -0.7
SMARCA2P51531 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA2P51531 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC10.66□□□□□ -0.7
SMARCA2P51531 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms