Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RAB28P51157 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RAB28P51157 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RAB28P51157 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAB28P51157 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.13□□□□□ -1.43
RAB28P51157 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
RAB28P51157 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RAB28P51157 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAB28P51157 AC005261.2-201ENST00000593427 4258 ntBASIC6.13□□□□□ -1.43
RAB28P51157 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RAB28P51157 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAB28P51157 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RAB28P51157 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.12□□□□□ -1.43
RAB28P51157 MAPK10-287ENST00000641217 3037 ntBASIC6.12□□□□□ -1.43
RAB28P51157 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.12□□□□□ -1.43
RAB28P51157 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 RNA5SP232-201ENST00000364144 119 ntBASIC6.12□□□□□ -1.43
RAB28P51157 MIR188-201ENST00000385034 86 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AC240504.1-201ENST00000395709 845 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AL157702.1-201ENST00000398764 426 ntBASIC6.12□□□□□ -1.43
RAB28P51157 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.12□□□□□ -1.43
RAB28P51157 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
RAB28P51157 AKAP17BP-201ENST00000431706 2719 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RAB28P51157 AC094019.1-201ENST00000434678 472 ntBASIC6.12□□□□□ -1.43
RAB28P51157 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.12□□□□□ -1.43
RAB28P51157 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RAB28P51157 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.12□□□□□ -1.43
RAB28P51157 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.12□□□□□ -1.43
RAB28P51157 RNU6-775P-201ENST00000459318 96 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AC104849.1-201ENST00000462623 405 ntBASIC6.12□□□□□ -1.43
RAB28P51157 RN7SL362P-201ENST00000494228 267 ntBASIC6.12□□□□□ -1.43
RAB28P51157 RPS26P24-201ENST00000497656 331 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AC106822.1-201ENST00000502647 526 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AC138409.2-202ENST00000507274 458 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AC147055.1-201ENST00000509261 750 ntBASIC6.12□□□□□ -1.43
RAB28P51157 RNA5SP206-201ENST00000516703 121 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.12□□□□□ -1.43
RAB28P51157 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.12□□□□□ -1.43
RAB28P51157 AP000641.1-201ENST00000531988 1639 ntBASIC6.12□□□□□ -1.43
RAB28P51157 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.12□□□□□ -1.43
RAB28P51157 AL391261.1-201ENST00000555712 1479 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AC244034.2-201ENST00000562504 509 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
RAB28P51157 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.12□□□□□ -1.43
RAB28P51157 AC138473.1-201ENST00000605717 526 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AL513218.1-201ENST00000606527 391 ntBASIC6.12□□□□□ -1.43
RAB28P51157 AC024255.1-201ENST00000614376 102 ntBASIC6.12□□□□□ -1.43
RAB28P51157 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.12□□□□□ -1.43
RAB28P51157 AL353684.1-201ENST00000622677 1120 ntBASIC6.12□□□□□ -1.43
RAB28P51157 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RAB28P51157 CASC19-274ENST00000642018 970 ntBASIC6.12□□□□□ -1.43
RAB28P51157 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RAB28P51157 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.12□□□□□ -1.43
RAB28P51157 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAB28P51157 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.12□□□□□ -1.43
RAB28P51157 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.12□□□□□ -1.43
RAB28P51157 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 AC105749.1-201ENST00000631338 2008 ntBASIC6.11□□□□□ -1.43
RAB28P51157 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.11□□□□□ -1.43
RAB28P51157 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 CAP1P2-201ENST00000417455 1409 ntBASIC6.11□□□□□ -1.43
RAB28P51157 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.11□□□□□ -1.43
RAB28P51157 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.11□□□□□ -1.43
RAB28P51157 AC017078.1-201ENST00000416146 368 ntBASIC6.11□□□□□ -1.43
RAB28P51157 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RAB28P51157 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.11□□□□□ -1.43
RAB28P51157 GAPDHP34-201ENST00000432112 823 ntBASIC6.11□□□□□ -1.43
RAB28P51157 AL645936.1-201ENST00000441979 518 ntBASIC6.11□□□□□ -1.43
RAB28P51157 MORF4-201ENST00000447135 971 ntBASIC6.11□□□□□ -1.43
RAB28P51157 AC093166.3-201ENST00000448785 303 ntBASIC6.11□□□□□ -1.43
RAB28P51157 VPS25P1-201ENST00000455691 508 ntBASIC6.11□□□□□ -1.43
RAB28P51157 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.11□□□□□ -1.43
RAB28P51157 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.11□□□□□ -1.43
RAB28P51157 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.11□□□□□ -1.43
RAB28P51157 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.11□□□□□ -1.43
RAB28P51157 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.11□□□□□ -1.43
RAB28P51157 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms