Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC092601.1-201ENST00000444526 383 ntBASIC7.65□□□□□ -1.18
MRE11P49959 HMGN1P2-201ENST00000445197 310 ntBASIC7.65□□□□□ -1.18
MRE11P49959 AL022319.1-201ENST00000458183 1167 ntBASIC7.65□□□□□ -1.18
MRE11P49959 snoU13.29-201ENST00000459370 104 ntBASIC7.65□□□□□ -1.18
MRE11P49959 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.65□□□□□ -1.18
MRE11P49959 AC119751.4-201ENST00000507498 357 ntBASIC7.65□□□□□ -1.18
MRE11P49959 ST13P12-201ENST00000508958 1094 ntBASIC7.65□□□□□ -1.18
MRE11P49959 NREP-217ENST00000509025 987 ntTSL 3 BASIC7.65□□□□□ -1.18
MRE11P49959 NREP-223ENST00000515855 801 ntTSL 4 BASIC7.65□□□□□ -1.18
MRE11P49959 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.65□□□□□ -1.18
MRE11P49959 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.65□□□□□ -1.18
MRE11P49959 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.65□□□□□ -1.18
MRE11P49959 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.65□□□□□ -1.18
MRE11P49959 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.65□□□□□ -1.18
MRE11P49959 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.65□□□□□ -1.18
MRE11P49959 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.65□□□□□ -1.18
MRE11P49959 AL357094.1-201ENST00000603845 844 ntBASIC7.65□□□□□ -1.18
MRE11P49959 AC024589.2-201ENST00000605642 1294 ntBASIC7.65□□□□□ -1.18
MRE11P49959 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.65□□□□□ -1.18
MRE11P49959 AC079776.5-201ENST00000641920 211 ntBASIC7.65□□□□□ -1.18
MRE11P49959 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
MRE11P49959 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
MRE11P49959 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.65□□□□□ -1.19
MRE11P49959 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
MRE11P49959 MTCO1P25-201ENST00000414449 1799 ntBASIC7.64□□□□□ -1.19
MRE11P49959 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
MRE11P49959 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.64□□□□□ -1.19
MRE11P49959 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC7.64□□□□□ -1.19
MRE11P49959 RNU12-2P-201ENST00000364789 156 ntBASIC7.64□□□□□ -1.19
MRE11P49959 GNG5P2-201ENST00000372054 207 ntBASIC7.64□□□□□ -1.19
MRE11P49959 RPS3AP5-201ENST00000389400 821 ntBASIC7.64□□□□□ -1.19
MRE11P49959 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 RPL23AP17-201ENST00000401064 499 ntBASIC7.64□□□□□ -1.19
MRE11P49959 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 RN7SKP229-201ENST00000410465 302 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.64□□□□□ -1.19
MRE11P49959 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 AC231533.2-201ENST00000419045 978 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.64□□□□□ -1.19
MRE11P49959 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.64□□□□□ -1.19
MRE11P49959 NPM1P30-201ENST00000425092 828 ntBASIC7.64□□□□□ -1.19
MRE11P49959 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC7.64□□□□□ -1.19
MRE11P49959 MTCYBP15-201ENST00000433123 1127 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AL354893.1-201ENST00000433735 348 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AL590762.3-201ENST00000436372 640 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.64□□□□□ -1.19
MRE11P49959 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 NPM1P27-201ENST00000502784 830 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AC106806.2-201ENST00000509365 500 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.64□□□□□ -1.19
MRE11P49959 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.64□□□□□ -1.19
MRE11P49959 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.64□□□□□ -1.19
MRE11P49959 AC012146.2-201ENST00000576545 416 ntBASIC7.64□□□□□ -1.19
MRE11P49959 MTND2P13-201ENST00000577438 1039 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.64□□□□□ -1.19
MRE11P49959 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 RPSAP66-201ENST00000592196 606 ntBASIC7.64□□□□□ -1.19
MRE11P49959 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.64□□□□□ -1.19
MRE11P49959 NDUFB9P1-201ENST00000604683 510 ntBASIC7.64□□□□□ -1.19
MRE11P49959 RN7SL261P-201ENST00000613441 282 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AC009269.6-201ENST00000621778 588 ntBASIC7.64□□□□□ -1.19
MRE11P49959 AC097655.1-201ENST00000635075 318 ntBASIC7.64□□□□□ -1.19
MRE11P49959 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.64□□□□□ -1.19
MRE11P49959 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.64□□□□□ -1.19
MRE11P49959 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
MRE11P49959 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.64□□□□□ -1.19
MRE11P49959 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.64□□□□□ -1.19
MRE11P49959 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
MRE11P49959 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
MRE11P49959 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
MRE11P49959 AC062022.1-201ENST00000451026 1684 ntBASIC7.63□□□□□ -1.19
MRE11P49959 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
MRE11P49959 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
MRE11P49959 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.63□□□□□ -1.19
MRE11P49959 AL355834.1-201ENST00000556602 3965 ntBASIC7.63□□□□□ -1.19
MRE11P49959 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
MRE11P49959 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
MRE11P49959 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
MRE11P49959 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
MRE11P49959 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
MRE11P49959 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
MRE11P49959 AC010624.4-201ENST00000597606 1351 ntBASIC7.63□□□□□ -1.19
MRE11P49959 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
MRE11P49959 AC011455.2-201ENST00000599320 3336 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AL627171.1-201ENST00000618845 1308 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms