Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HTTP42858 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.45□□□□□ -1.38
HTTP42858 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC6.45□□□□□ -1.38
HTTP42858 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HTTP42858 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HTTP42858 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.44□□□□□ -1.38
HTTP42858 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HTTP42858 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.44□□□□□ -1.38
HTTP42858 RNA5SP305-201ENST00000362665 119 ntBASIC6.44□□□□□ -1.38
HTTP42858 SNORA17.1-201ENST00000362945 126 ntBASIC6.44□□□□□ -1.38
HTTP42858 SNORA16A-201ENST00000384342 137 ntBASIC6.44□□□□□ -1.38
HTTP42858 AC087672.1-201ENST00000479876 766 ntBASIC6.44□□□□□ -1.38
HTTP42858 OR7E158P-201ENST00000524483 910 ntBASIC6.44□□□□□ -1.38
HTTP42858 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.44□□□□□ -1.38
HTTP42858 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.44□□□□□ -1.38
HTTP42858 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.44□□□□□ -1.38
HTTP42858 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.44□□□□□ -1.38
HTTP42858 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.44□□□□□ -1.38
HTTP42858 GPR107-201ENST00000347136 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.44□□□□□ -1.38
HTTP42858 RPL23AP60-201ENST00000450011 454 ntBASIC6.44□□□□□ -1.38
HTTP42858 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.44□□□□□ -1.38
HTTP42858 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.44□□□□□ -1.38
HTTP42858 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.44□□□□□ -1.38
HTTP42858 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.44□□□□□ -1.38
HTTP42858 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HTTP42858 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
HTTP42858 AC011504.1-201ENST00000623331 4103 ntBASIC6.44□□□□□ -1.38
HTTP42858 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
HTTP42858 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.44□□□□□ -1.38
HTTP42858 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HTTP42858 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HTTP42858 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC6.43□□□□□ -1.38
HTTP42858 AC112243.1-201ENST00000623949 3851 ntBASIC6.43□□□□□ -1.38
HTTP42858 SNORA70.2-201ENST00000364506 135 ntBASIC6.43□□□□□ -1.38
HTTP42858 SCARNA6.1-201ENST00000516989 238 ntBASIC6.43□□□□□ -1.38
HTTP42858 OR4A40P-201ENST00000533878 948 ntBASIC6.43□□□□□ -1.38
HTTP42858 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.43□□□□□ -1.38
HTTP42858 AC073869.10-201ENST00000642016 354 ntBASIC6.43□□□□□ -1.38
HTTP42858 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HTTP42858 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC6.43□□□□□ -1.38
HTTP42858 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC6.43□□□□□ -1.38
HTTP42858 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 AL162456.1-201ENST00000634535 2006 ntBASIC6.43□□□□□ -1.38
HTTP42858 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 SNURFL-201ENST00000309296 343 ntBASIC6.43□□□□□ -1.38
HTTP42858 OR4K12P-201ENST00000406538 961 ntBASIC6.43□□□□□ -1.38
HTTP42858 RPS18P6-201ENST00000476880 458 ntBASIC6.43□□□□□ -1.38
HTTP42858 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.43□□□□□ -1.38
HTTP42858 RAB9BP1-201ENST00000519581 626 ntBASIC6.43□□□□□ -1.38
HTTP42858 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.43□□□□□ -1.38
HTTP42858 MIR5096-201ENST00000583713 70 ntBASIC6.43□□□□□ -1.38
HTTP42858 AC068790.7-201ENST00000602347 528 ntBASIC6.43□□□□□ -1.38
HTTP42858 AC104687.2-201ENST00000604442 342 ntBASIC6.43□□□□□ -1.38
HTTP42858 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HTTP42858 AL133243.4-201ENST00000623116 3109 ntBASIC6.43□□□□□ -1.38
HTTP42858 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.43□□□□□ -1.38
HTTP42858 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HTTP42858 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC6.43□□□□□ -1.38
HTTP42858 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HTTP42858 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.43□□□□□ -1.38
HTTP42858 TPT1P13-201ENST00000449760 499 ntBASIC6.43□□□□□ -1.38
HTTP42858 RN7SL570P-201ENST00000484405 292 ntBASIC6.43□□□□□ -1.38
HTTP42858 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.43□□□□□ -1.38
HTTP42858 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HTTP42858 EPS15P1-202ENST00000459691 2071 ntBASIC6.43□□□□□ -1.38
HTTP42858 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HTTP42858 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
HTTP42858 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HTTP42858 CASC19-281ENST00000642118 1554 ntBASIC6.42□□□□□ -1.38
HTTP42858 RPRD2-202ENST00000369068 4612 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms