Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC018628.1-201ENST00000624147 3819 ntBASIC5.82□□□□□ -1.48
RFC3P40938 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.82□□□□□ -1.48
RFC3P40938 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.82□□□□□ -1.48
RFC3P40938 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RFC3P40938 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.82□□□□□ -1.48
RFC3P40938 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RFC3P40938 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RFC3P40938 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.82□□□□□ -1.48
RFC3P40938 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RFC3P40938 STAG3L4-201ENST00000352103 530 ntBASIC5.82□□□□□ -1.48
RFC3P40938 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 SNORA70H-201ENST00000383910 135 ntBASIC5.82□□□□□ -1.48
RFC3P40938 SNORA70J-201ENST00000384182 135 ntBASIC5.82□□□□□ -1.48
RFC3P40938 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.82□□□□□ -1.48
RFC3P40938 SNORA77.2-201ENST00000408571 112 ntBASIC5.82□□□□□ -1.48
RFC3P40938 RNA5SP251-201ENST00000410614 137 ntBASIC5.82□□□□□ -1.48
RFC3P40938 OR5W1P-201ENST00000423705 938 ntBASIC5.82□□□□□ -1.48
RFC3P40938 AL354707.3-201ENST00000427308 331 ntBASIC5.82□□□□□ -1.48
RFC3P40938 AC112492.2-201ENST00000432774 1030 ntBASIC5.82□□□□□ -1.48
RFC3P40938 KATNBL1P2-201ENST00000433311 835 ntBASIC5.82□□□□□ -1.48
RFC3P40938 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.82□□□□□ -1.48
RFC3P40938 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RFC3P40938 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.82□□□□□ -1.48
RFC3P40938 RPL12P30-201ENST00000488389 499 ntBASIC5.82□□□□□ -1.48
RFC3P40938 AP002453.1-201ENST00000492327 668 ntBASIC5.82□□□□□ -1.48
RFC3P40938 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.82□□□□□ -1.48
RFC3P40938 AC083906.1-201ENST00000509298 406 ntBASIC5.82□□□□□ -1.48
RFC3P40938 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.82□□□□□ -1.48
RFC3P40938 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.82□□□□□ -1.48
RFC3P40938 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC5.82□□□□□ -1.48
RFC3P40938 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.82□□□□□ -1.48
RFC3P40938 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.82□□□□□ -1.48
RFC3P40938 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.82□□□□□ -1.48
RFC3P40938 AC079315.1-201ENST00000602952 623 ntBASIC5.82□□□□□ -1.48
RFC3P40938 AC025171.4-201ENST00000607250 1047 ntBASIC5.82□□□□□ -1.48
RFC3P40938 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.82□□□□□ -1.48
RFC3P40938 MIR6861-201ENST00000618657 64 ntBASIC5.82□□□□□ -1.48
RFC3P40938 AL359742.1-201ENST00000622497 540 ntBASIC5.82□□□□□ -1.48
RFC3P40938 OR7E91P-202ENST00000642062 1198 ntBASIC5.82□□□□□ -1.48
RFC3P40938 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
RFC3P40938 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 AC105114.1-201ENST00000624795 1862 ntBASIC5.81□□□□□ -1.48
RFC3P40938 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RFC3P40938 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.81□□□□□ -1.48
RFC3P40938 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.81□□□□□ -1.48
RFC3P40938 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
RFC3P40938 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.81□□□□□ -1.48
RFC3P40938 AL139415.1-201ENST00000424862 352 ntBASIC5.81□□□□□ -1.48
RFC3P40938 AC069154.1-201ENST00000432914 542 ntBASIC5.81□□□□□ -1.48
RFC3P40938 AC094019.1-201ENST00000434678 472 ntBASIC5.81□□□□□ -1.48
RFC3P40938 AL590399.4-201ENST00000436561 601 ntBASIC5.81□□□□□ -1.48
RFC3P40938 HMGN1P2-201ENST00000445197 310 ntBASIC5.81□□□□□ -1.48
RFC3P40938 AC010240.2-201ENST00000445363 1205 ntBASIC5.81□□□□□ -1.48
RFC3P40938 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.81□□□□□ -1.48
RFC3P40938 AL139156.3-201ENST00000454802 394 ntBASIC5.81□□□□□ -1.48
RFC3P40938 AL133351.3-201ENST00000454998 193 ntBASIC5.81□□□□□ -1.48
RFC3P40938 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.81□□□□□ -1.48
RFC3P40938 NPM1P27-201ENST00000502784 830 ntBASIC5.81□□□□□ -1.48
RFC3P40938 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.81□□□□□ -1.48
RFC3P40938 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.81□□□□□ -1.48
RFC3P40938 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.81□□□□□ -1.48
RFC3P40938 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.81□□□□□ -1.48
RFC3P40938 AC090115.2-201ENST00000548060 883 ntBASIC5.81□□□□□ -1.48
RFC3P40938 HNRNPCP1-201ENST00000556181 766 ntBASIC5.81□□□□□ -1.48
RFC3P40938 MRPS21P8-201ENST00000569196 235 ntBASIC5.81□□□□□ -1.48
RFC3P40938 AL359704.2-201ENST00000604335 521 ntBASIC5.81□□□□□ -1.48
RFC3P40938 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.81□□□□□ -1.48
RFC3P40938 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.81□□□□□ -1.48
RFC3P40938 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.81□□□□□ -1.48
RFC3P40938 MIR1910-201ENST00000636955 80 ntBASIC5.81□□□□□ -1.48
RFC3P40938 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFC3P40938 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RFC3P40938 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms