Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC13P31276 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
HOXC13P31276 PABPC1P8-201ENST00000452851 2086 ntBASIC6.67□□□□□ -1.34
HOXC13P31276 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HOXC13P31276 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HOXC13P31276 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC13P31276 CASC19-243ENST00000641588 1546 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HOXC13P31276 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC13P31276 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC13P31276 AC066692.1-201ENST00000421721 457 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC13P31276 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC13P31276 CXCR2P1-202ENST00000443392 1074 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 RPL5P7-201ENST00000444235 813 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC13P31276 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC13P31276 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.66□□□□□ -1.34
HOXC13P31276 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.66□□□□□ -1.34
HOXC13P31276 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC13P31276 AC026898.1-201ENST00000586404 571 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC13P31276 AC067773.1-201ENST00000603284 1094 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC13P31276 CYCSP1-201ENST00000604815 315 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 MIR6085-201ENST00000618314 110 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 LINC02495-203ENST00000636704 242 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.66□□□□□ -1.34
HOXC13P31276 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 SNX18P3-202ENST00000565670 1750 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
HOXC13P31276 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
HOXC13P31276 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC13P31276 AL353743.3-201ENST00000442109 1468 ntBASIC6.66□□□□□ -1.34
HOXC13P31276 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.66□□□□□ -1.34
HOXC13P31276 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HOXC13P31276 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HOXC13P31276 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
HOXC13P31276 CASC19-246ENST00000641625 1606 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
HOXC13P31276 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
HOXC13P31276 RNA5SP110-201ENST00000362638 115 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 RN7SKP229-201ENST00000410465 302 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 RNU2-22P-201ENST00000411266 212 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 DHFRP2-201ENST00000414224 547 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.65□□□□□ -1.34
HOXC13P31276 AC097721.1-201ENST00000427150 1253 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.65□□□□□ -1.34
HOXC13P31276 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HOXC13P31276 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.65□□□□□ -1.34
HOXC13P31276 OR2L9P-201ENST00000444456 913 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.65□□□□□ -1.34
HOXC13P31276 MTND6P5-201ENST00000448266 512 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 HMGB1P7-201ENST00000450921 612 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.65□□□□□ -1.34
HOXC13P31276 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.65□□□□□ -1.34
HOXC13P31276 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.65□□□□□ -1.34
HOXC13P31276 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.65□□□□□ -1.34
HOXC13P31276 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.65□□□□□ -1.34
HOXC13P31276 IGKV3D-25-201ENST00000519599 235 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.65□□□□□ -1.34
HOXC13P31276 KCTD9P4-201ENST00000526766 1166 ntBASIC6.65□□□□□ -1.34
HOXC13P31276 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.65□□□□□ -1.34
HOXC13P31276 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.65□□□□□ -1.34
HOXC13P31276 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.65□□□□□ -1.34
HOXC13P31276 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.65□□□□□ -1.34
HOXC13P31276 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.65□□□□□ -1.34
HOXC13P31276 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
HOXC13P31276 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.65□□□□□ -1.35
HOXC13P31276 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HOXC13P31276 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
HOXC13P31276 AC010401.2-201ENST00000575137 4934 ntBASIC6.65□□□□□ -1.35
HOXC13P31276 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
HOXC13P31276 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.65□□□□□ -1.35
HOXC13P31276 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.35
HOXC13P31276 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC13P31276 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC13P31276 TNPO1P2-201ENST00000426249 2665 ntBASIC6.64□□□□□ -1.35
HOXC13P31276 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC13P31276 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC13P31276 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC13P31276 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC13P31276 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC13P31276 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
HOXC13P31276 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
HOXC13P31276 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
HOXC13P31276 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC13P31276 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.64□□□□□ -1.35
HOXC13P31276 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms