Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC10.44□□□□□ -0.74
TOP2AP11388 IGBP1P1-201ENST00000554337 1009 ntBASIC10.44□□□□□ -0.74
TOP2AP11388 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC10.44□□□□□ -0.74
TOP2AP11388 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC10.44□□□□□ -0.74
TOP2AP11388 AL139099.4-201ENST00000614802 114 ntBASIC10.44□□□□□ -0.74
TOP2AP11388 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC10.44□□□□□ -0.74
TOP2AP11388 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
TOP2AP11388 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC10.44□□□□□ -0.74
TOP2AP11388 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC10.44□□□□□ -0.74
TOP2AP11388 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TOP2AP11388 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
TOP2AP11388 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TOP2AP11388 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TOP2AP11388 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC10.44□□□□□ -0.74
TOP2AP11388 AC008937.3-201ENST00000606813 1700 ntBASIC10.44□□□□□ -0.74
TOP2AP11388 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
TOP2AP11388 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC10.44□□□□□ -0.74
TOP2AP11388 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC10.44□□□□□ -0.74
TOP2AP11388 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TOP2AP11388 AL136531.3-201ENST00000624378 3658 ntBASIC10.44□□□□□ -0.74
TOP2AP11388 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TOP2AP11388 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
TOP2AP11388 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
TOP2AP11388 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 FAM32BP-201ENST00000344033 333 ntBASIC10.43□□□□□ -0.74
TOP2AP11388 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC10.43□□□□□ -0.74
TOP2AP11388 CFL1P1-202ENST00000432948 411 ntBASIC10.43□□□□□ -0.74
TOP2AP11388 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC10.43□□□□□ -0.74
TOP2AP11388 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC10.43□□□□□ -0.74
TOP2AP11388 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC10.43□□□□□ -0.74
TOP2AP11388 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC10.43□□□□□ -0.74
TOP2AP11388 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC10.43□□□□□ -0.74
TOP2AP11388 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC10.43□□□□□ -0.74
TOP2AP11388 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC10.43□□□□□ -0.74
TOP2AP11388 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC10.43□□□□□ -0.74
TOP2AP11388 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC10.43□□□□□ -0.74
TOP2AP11388 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 AC117409.1-201ENST00000470499 1310 ntBASIC10.43□□□□□ -0.74
TOP2AP11388 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
TOP2AP11388 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
TOP2AP11388 TPT1-204ENST00000379060 764 ntTSL 5 BASIC10.43□□□□□ -0.74
TOP2AP11388 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC10.43□□□□□ -0.74
TOP2AP11388 HMGB3P24-201ENST00000433260 622 ntBASIC10.43□□□□□ -0.74
TOP2AP11388 AL451136.1-201ENST00000435399 325 ntBASIC10.43□□□□□ -0.74
TOP2AP11388 RN7SL184P-201ENST00000488308 297 ntBASIC10.43□□□□□ -0.74
TOP2AP11388 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC10.43□□□□□ -0.74
TOP2AP11388 AC244502.2-201ENST00000543361 851 ntBASIC10.43□□□□□ -0.74
TOP2AP11388 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC10.43□□□□□ -0.74
TOP2AP11388 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC10.43□□□□□ -0.74
TOP2AP11388 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
TOP2AP11388 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TOP2AP11388 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
TOP2AP11388 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
TOP2AP11388 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC10.42□□□□□ -0.74
TOP2AP11388 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
TOP2AP11388 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC10.42□□□□□ -0.74
TOP2AP11388 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC10.42□□□□□ -0.74
TOP2AP11388 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
TOP2AP11388 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC10.42□□□□□ -0.74
TOP2AP11388 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC10.42□□□□□ -0.74
TOP2AP11388 AL663074.2-201ENST00000440621 479 ntBASIC10.42□□□□□ -0.74
TOP2AP11388 OARD1-211ENST00000480585 829 ntTSL 3 BASIC10.42□□□□□ -0.74
TOP2AP11388 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC10.42□□□□□ -0.74
TOP2AP11388 AC073581.1-201ENST00000519036 575 ntBASIC10.42□□□□□ -0.74
TOP2AP11388 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC10.42□□□□□ -0.74
TOP2AP11388 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC10.42□□□□□ -0.74
TOP2AP11388 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC10.42□□□□□ -0.74
TOP2AP11388 TCL6_3.1-201ENST00000619064 137 ntBASIC10.42□□□□□ -0.74
TOP2AP11388 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TOP2AP11388 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TOP2AP11388 YES1P1-201ENST00000418510 1628 ntBASIC10.42□□□□□ -0.74
TOP2AP11388 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
TOP2AP11388 COL6A4P1-202ENST00000487147 4317 ntBASIC10.42□□□□□ -0.74
TOP2AP11388 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
TOP2AP11388 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
TOP2AP11388 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
TOP2AP11388 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TOP2AP11388 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
TOP2AP11388 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
TOP2AP11388 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
TOP2AP11388 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC10.41□□□□□ -0.74
TOP2AP11388 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
TOP2AP11388 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
TOP2AP11388 U3.2-201ENST00000362981 210 ntBASIC10.41□□□□□ -0.74
TOP2AP11388 AL357752.1-201ENST00000412817 349 ntBASIC10.41□□□□□ -0.74
TOP2AP11388 AC015977.1-201ENST00000418887 292 ntBASIC10.41□□□□□ -0.74
TOP2AP11388 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC10.41□□□□□ -0.74
TOP2AP11388 RN7SL826P-201ENST00000479724 288 ntBASIC10.41□□□□□ -0.74
TOP2AP11388 AC009120.1-201ENST00000493458 473 ntBASIC10.41□□□□□ -0.74
TOP2AP11388 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC10.41□□□□□ -0.74
TOP2AP11388 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC10.41□□□□□ -0.74
TOP2AP11388 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC10.41□□□□□ -0.74
TOP2AP11388 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms