Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CD28P10747 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD28P10747 AP000866.6-201ENST00000638898 3579 ntBASIC4.93□□□□□ -1.62
CD28P10747 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD28P10747 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD28P10747 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CD28P10747 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CD28P10747 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC4.93□□□□□ -1.62
CD28P10747 CUBNP3-201ENST00000457461 1784 ntBASIC4.93□□□□□ -1.62
CD28P10747 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC4.93□□□□□ -1.62
CD28P10747 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.93□□□□□ -1.62
CD28P10747 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC4.93□□□□□ -1.62
CD28P10747 EIF3EP1-201ENST00000433978 1316 ntBASIC4.93□□□□□ -1.62
CD28P10747 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CD28P10747 ABCA11P-202ENST00000504019 2110 ntBASIC4.93□□□□□ -1.62
CD28P10747 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CD28P10747 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 AC062022.1-201ENST00000451026 1684 ntBASIC4.92□□□□□ -1.62
CD28P10747 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 ZNF969P-201ENST00000510345 2341 ntBASIC4.92□□□□□ -1.62
CD28P10747 AL354854.1-201ENST00000455940 1363 ntBASIC4.92□□□□□ -1.62
CD28P10747 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 AC083806.2-201ENST00000617795 2685 ntBASIC4.92□□□□□ -1.62
CD28P10747 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 AC105114.1-201ENST00000624795 1862 ntBASIC4.92□□□□□ -1.62
CD28P10747 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 CDY5P-201ENST00000411487 1580 ntBASIC4.92□□□□□ -1.62
CD28P10747 CDY9P-201ENST00000451397 1580 ntBASIC4.92□□□□□ -1.62
CD28P10747 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC4.92□□□□□ -1.62
CD28P10747 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 RNA5SP435-201ENST00000364044 108 ntBASIC4.92□□□□□ -1.62
CD28P10747 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CD28P10747 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC4.92□□□□□ -1.62
CD28P10747 NAP1L4P2-201ENST00000425958 899 ntBASIC4.92□□□□□ -1.62
CD28P10747 RPS29P14-201ENST00000431518 171 ntBASIC4.92□□□□□ -1.62
CD28P10747 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC4.92□□□□□ -1.62
CD28P10747 ATP5LP2-201ENST00000440646 311 ntBASIC4.92□□□□□ -1.62
CD28P10747 AC097463.1-201ENST00000447288 481 ntBASIC4.92□□□□□ -1.62
CD28P10747 PPIAP7-201ENST00000454070 489 ntBASIC4.92□□□□□ -1.62
CD28P10747 AC023194.2-201ENST00000465398 406 ntBASIC4.92□□□□□ -1.62
CD28P10747 RN7SL221P-201ENST00000466190 281 ntBASIC4.92□□□□□ -1.62
CD28P10747 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.92□□□□□ -1.62
CD28P10747 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 IGKV3D-25-201ENST00000519599 235 ntBASIC4.92□□□□□ -1.62
CD28P10747 AP004607.6-201ENST00000525033 1202 ntBASIC4.92□□□□□ -1.62
CD28P10747 AP000620.1-201ENST00000527147 504 ntBASIC4.92□□□□□ -1.62
CD28P10747 OR4A13P-201ENST00000529316 942 ntBASIC4.92□□□□□ -1.62
CD28P10747 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC4.92□□□□□ -1.62
CD28P10747 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.92□□□□□ -1.62
CD28P10747 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.92□□□□□ -1.62
CD28P10747 AL359704.2-201ENST00000604335 521 ntBASIC4.92□□□□□ -1.62
CD28P10747 AC004801.6-201ENST00000616571 978 ntBASIC4.92□□□□□ -1.62
CD28P10747 SNX18P12-201ENST00000624821 759 ntBASIC4.92□□□□□ -1.62
CD28P10747 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CD28P10747 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC4.92□□□□□ -1.62
CD28P10747 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CD28P10747 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.92□□□□□ -1.62
CD28P10747 AC018717.1-201ENST00000457712 1505 ntBASIC4.92□□□□□ -1.62
CD28P10747 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.91□□□□□ -1.62
CD28P10747 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CD28P10747 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC4.91□□□□□ -1.62
CD28P10747 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 AL449283.1-201ENST00000602631 3403 ntBASIC4.91□□□□□ -1.62
CD28P10747 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CD28P10747 OR2M1P-201ENST00000318104 951 ntBASIC4.91□□□□□ -1.62
CD28P10747 RNA5SP110-201ENST00000362638 115 ntBASIC4.91□□□□□ -1.62
CD28P10747 RNA5SP188-201ENST00000362916 129 ntBASIC4.91□□□□□ -1.62
CD28P10747 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CD28P10747 MIR130B-202ENST00000385018 82 ntBASIC4.91□□□□□ -1.62
CD28P10747 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.91□□□□□ -1.62
CD28P10747 AC066692.1-201ENST00000421721 457 ntBASIC4.91□□□□□ -1.62
CD28P10747 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC4.91□□□□□ -1.62
CD28P10747 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.91□□□□□ -1.62
CD28P10747 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms