Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RB1P06400 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.75□□□□□ -1.33
RB1P06400 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.75□□□□□ -1.33
RB1P06400 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.75□□□□□ -1.33
RB1P06400 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 CASC19-228ENST00000641414 1684 ntBASIC6.75□□□□□ -1.33
RB1P06400 AC130360.2-201ENST00000533477 1556 ntBASIC6.75□□□□□ -1.33
RB1P06400 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
RB1P06400 OR52B3P-201ENST00000314715 928 ntBASIC6.75□□□□□ -1.33
RB1P06400 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RB1P06400 RNU1-134P-201ENST00000362935 165 ntBASIC6.75□□□□□ -1.33
RB1P06400 RNU1-46P-201ENST00000384425 164 ntBASIC6.75□□□□□ -1.33
RB1P06400 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RB1P06400 MIR541-201ENST00000401360 84 ntBASIC6.75□□□□□ -1.33
RB1P06400 RN7SKP121-201ENST00000410842 305 ntBASIC6.75□□□□□ -1.33
RB1P06400 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.75□□□□□ -1.33
RB1P06400 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.75□□□□□ -1.33
RB1P06400 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.75□□□□□ -1.33
RB1P06400 RPS27AP2-201ENST00000457576 465 ntBASIC6.75□□□□□ -1.33
RB1P06400 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.75□□□□□ -1.33
RB1P06400 RN7SL717P-201ENST00000478343 297 ntBASIC6.75□□□□□ -1.33
RB1P06400 AC022415.1-202ENST00000486612 523 ntBASIC6.75□□□□□ -1.33
RB1P06400 AC063943.2-201ENST00000495697 534 ntBASIC6.75□□□□□ -1.33
RB1P06400 RNA5SP438-201ENST00000516561 112 ntBASIC6.75□□□□□ -1.33
RB1P06400 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.75□□□□□ -1.33
RB1P06400 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.75□□□□□ -1.33
RB1P06400 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.75□□□□□ -1.33
RB1P06400 AC020978.7-201ENST00000575953 1187 ntBASIC6.75□□□□□ -1.33
RB1P06400 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.75□□□□□ -1.33
RB1P06400 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.75□□□□□ -1.33
RB1P06400 AL157899.1-201ENST00000604110 936 ntBASIC6.75□□□□□ -1.33
RB1P06400 AC010998.3-201ENST00000613871 631 ntBASIC6.75□□□□□ -1.33
RB1P06400 AC022467.1-201ENST00000614738 749 ntBASIC6.75□□□□□ -1.33
RB1P06400 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
RB1P06400 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 CR383656.5-201ENST00000547616 1340 ntBASIC6.75□□□□□ -1.33
RB1P06400 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RB1P06400 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RB1P06400 AC007485.2-201ENST00000623493 1667 ntBASIC6.74□□□□□ -1.33
RB1P06400 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 AC007993.1-201ENST00000621298 2430 ntBASIC6.74□□□□□ -1.33
RB1P06400 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 RN7SKP292-201ENST00000365522 317 ntBASIC6.74□□□□□ -1.33
RB1P06400 BMS1P13-201ENST00000417301 885 ntBASIC6.74□□□□□ -1.33
RB1P06400 AK3P5-201ENST00000432033 519 ntBASIC6.74□□□□□ -1.33
RB1P06400 OR3D1P-201ENST00000438288 955 ntBASIC6.74□□□□□ -1.33
RB1P06400 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RB1P06400 BMS1P10-201ENST00000443754 1120 ntBASIC6.74□□□□□ -1.33
RB1P06400 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 BZW1P1-201ENST00000454901 1240 ntBASIC6.74□□□□□ -1.33
RB1P06400 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 AC023141.9-201ENST00000458734 412 ntBASIC6.74□□□□□ -1.33
RB1P06400 RN7SL561P-201ENST00000488553 281 ntBASIC6.74□□□□□ -1.33
RB1P06400 AC010343.2-201ENST00000510162 224 ntBASIC6.74□□□□□ -1.33
RB1P06400 CR383658.1-201ENST00000514609 734 ntBASIC6.74□□□□□ -1.33
RB1P06400 SCARNA18.1-201ENST00000516330 83 ntBASIC6.74□□□□□ -1.33
RB1P06400 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.74□□□□□ -1.33
RB1P06400 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.74□□□□□ -1.33
RB1P06400 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.74□□□□□ -1.33
RB1P06400 AC079600.1-201ENST00000550326 297 ntBASIC6.74□□□□□ -1.33
RB1P06400 AC135626.1-201ENST00000556983 435 ntBASIC6.74□□□□□ -1.33
RB1P06400 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.74□□□□□ -1.33
RB1P06400 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.74□□□□□ -1.33
RB1P06400 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.74□□□□□ -1.33
RB1P06400 AC108673.3-201ENST00000609183 335 ntBASIC6.74□□□□□ -1.33
RB1P06400 AL512624.1-201ENST00000613638 469 ntBASIC6.74□□□□□ -1.33
RB1P06400 AP005212.4-201ENST00000614206 710 ntBASIC6.74□□□□□ -1.33
RB1P06400 RFPL4AP6-201ENST00000616792 846 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms