Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.96□□□□□ -1.14
COL5A2P05997 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
COL5A2P05997 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
COL5A2P05997 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
COL5A2P05997 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
COL5A2P05997 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
COL5A2P05997 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
COL5A2P05997 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.96□□□□□ -1.14
COL5A2P05997 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
COL5A2P05997 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.96□□□□□ -1.14
COL5A2P05997 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.96□□□□□ -1.14
COL5A2P05997 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.95□□□□□ -1.14
COL5A2P05997 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.95□□□□□ -1.14
COL5A2P05997 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
COL5A2P05997 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.95□□□□□ -1.14
COL5A2P05997 MRPL53P1-201ENST00000414323 319 ntBASIC7.95□□□□□ -1.14
COL5A2P05997 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.95□□□□□ -1.14
COL5A2P05997 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.95□□□□□ -1.14
COL5A2P05997 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.95□□□□□ -1.14
COL5A2P05997 AC093763.2-201ENST00000505334 1223 ntBASIC7.95□□□□□ -1.14
COL5A2P05997 AC109481.1-201ENST00000509173 282 ntBASIC7.95□□□□□ -1.14
COL5A2P05997 BX510359.5-201ENST00000515651 304 ntBASIC7.95□□□□□ -1.14
COL5A2P05997 RNU6-615P-201ENST00000516065 106 ntBASIC7.95□□□□□ -1.14
COL5A2P05997 SNORA43.3-201ENST00000517240 103 ntBASIC7.95□□□□□ -1.14
COL5A2P05997 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.95□□□□□ -1.14
COL5A2P05997 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.95□□□□□ -1.14
COL5A2P05997 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
COL5A2P05997 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.95□□□□□ -1.14
COL5A2P05997 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.95□□□□□ -1.14
COL5A2P05997 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.95□□□□□ -1.14
COL5A2P05997 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.95□□□□□ -1.14
COL5A2P05997 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC7.95□□□□□ -1.14
COL5A2P05997 CASC19-222ENST00000641321 1173 ntBASIC7.95□□□□□ -1.14
COL5A2P05997 SAMMSON-227ENST00000642114 1199 ntBASIC7.95□□□□□ -1.14
COL5A2P05997 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
COL5A2P05997 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.95□□□□□ -1.14
COL5A2P05997 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.95□□□□□ -1.14
COL5A2P05997 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.95□□□□□ -1.14
COL5A2P05997 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.95□□□□□ -1.14
COL5A2P05997 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL5A2P05997 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
COL5A2P05997 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.95□□□□□ -1.14
COL5A2P05997 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A2P05997 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.94□□□□□ -1.14
COL5A2P05997 AC062029.1-202ENST00000606164 3651 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A2P05997 OR10R3P-201ENST00000361688 942 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 RNA5SP514-201ENST00000363717 111 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A2P05997 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A2P05997 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.94□□□□□ -1.14
COL5A2P05997 OR6E1P-201ENST00000414424 923 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 DNAJA1P6-201ENST00000437347 354 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 RPS27AP3-201ENST00000453803 454 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
COL5A2P05997 OR7E157P-201ENST00000494376 911 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 AC008953.1-201ENST00000497334 318 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A2P05997 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.94□□□□□ -1.14
COL5A2P05997 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A2P05997 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.94□□□□□ -1.14
COL5A2P05997 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.94□□□□□ -1.14
COL5A2P05997 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.94□□□□□ -1.14
COL5A2P05997 CR383656.5-201ENST00000547616 1340 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
COL5A2P05997 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
COL5A2P05997 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A2P05997 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A2P05997 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
COL5A2P05997 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
COL5A2P05997 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
COL5A2P05997 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.94□□□□□ -1.14
COL5A2P05997 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.94□□□□□ -1.14
COL5A2P05997 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
COL5A2P05997 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A2P05997 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
COL5A2P05997 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A2P05997 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A2P05997 RNA5SP375-201ENST00000362975 119 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
COL5A2P05997 AL390119.1-201ENST00000440329 312 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A2P05997 OTX2P1-201ENST00000450956 354 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A2P05997 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.94□□□□□ -1.14
COL5A2P05997 NDUFA5P12-201ENST00000503796 343 ntBASIC7.94□□□□□ -1.14
COL5A2P05997 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.94□□□□□ -1.14
COL5A2P05997 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
COL5A2P05997 OR4A46P-201ENST00000527255 933 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms