Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AL132875.1-201ENST00000403623 949 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 GCNT1P4-201ENST00000404096 329 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 MIR1275-201ENST00000408770 80 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 RPS7P8-201ENST00000418311 581 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AC016027.5-201ENST00000427227 210 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AC023141.3-201ENST00000436698 278 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 TIMM8BP2-201ENST00000445940 251 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 ZNF619P1-201ENST00000446539 752 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 PPIAP7-201ENST00000454070 489 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 RAB28P2-201ENST00000454299 641 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 SLC25A51P1-201ENST00000468432 871 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AP000620.1-201ENST00000527147 504 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AC007494.1-201ENST00000562293 760 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 PRELID3BP3-201ENST00000584963 545 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 MIR132-201ENST00000591554 101 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AC073333.2-201ENST00000603589 769 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AC004890.3-201ENST00000605566 1095 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AC018659.2-201ENST00000624690 715 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AL137918.1-201ENST00000624542 1922 ntBASIC6.2□□□□□ -1.42
HLA-DQB2P05538 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.2□□□□□ -1.42
HLA-DQB2P05538 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AL096829.1-201ENST00000413677 457 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 PTCD2P2-201ENST00000415579 1095 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 RPL35AP31-201ENST00000418340 337 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 RPS15AP30-201ENST00000420976 390 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AC130360.1-201ENST00000425489 1117 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 EEF1B2P3-201ENST00000447718 678 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 HMGB1P7-201ENST00000450921 612 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AC091874.2-201ENST00000505889 720 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 TPM3P3-201ENST00000521343 354 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AC130365.2-201ENST00000525882 1201 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AC007346.1-201ENST00000569208 867 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 MIR3154-201ENST00000577829 84 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AL359091.2-201ENST00000609303 556 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AC073389.3-201ENST00000609434 935 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AL162377.2-201ENST00000624532 337 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AL022323.4-201ENST00000623980 13120 ntBASIC6.19□□□□□ -1.42
HLA-DQB2P05538 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
HLA-DQB2P05538 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HLA-DQB2P05538 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms