Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MIR4697-201ENST00000582977 78 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 MIR193BHG-214ENST00000641765 509 ntBASIC5.73□□□□□ -1.49
SPTA1P02549 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
SPTA1P02549 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SPTA1P02549 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.72□□□□□ -1.49
SPTA1P02549 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 AC015871.3-201ENST00000618835 2261 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 OR7E101P-201ENST00000400428 513 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.72□□□□□ -1.49
SPTA1P02549 AC093155.2-201ENST00000420734 937 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 AC245047.5-201ENST00000437312 556 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 VN1R110P-201ENST00000438988 971 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 TPT1P12-201ENST00000448968 492 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.72□□□□□ -1.49
SPTA1P02549 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.72□□□□□ -1.49
SPTA1P02549 RN7SL466P-201ENST00000497546 295 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 AC122713.1-201ENST00000518368 1015 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.72□□□□□ -1.49
SPTA1P02549 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.72□□□□□ -1.49
SPTA1P02549 NBPF8-201ENST00000583271 5330 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC5.72□□□□□ -1.49
SPTA1P02549 AC092725.2-201ENST00000567658 1389 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.72□□□□□ -1.49
SPTA1P02549 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SPTA1P02549 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.72□□□□□ -1.49
SPTA1P02549 AC092865.4-201ENST00000477936 615 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 EIF3LP3-201ENST00000495197 822 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.72□□□□□ -1.49
SPTA1P02549 AC004825.1-201ENST00000555068 586 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 SKA2-207ENST00000583380 583 ntTSL 5 BASIC5.72□□□□□ -1.49
SPTA1P02549 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC5.72□□□□□ -1.49
SPTA1P02549 IMMP1LP3-201ENST00000604197 224 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 AL136131.3-201ENST00000607600 188 ntBASIC5.72□□□□□ -1.49
SPTA1P02549 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SPTA1P02549 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SPTA1P02549 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SPTA1P02549 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC5.71□□□□□ -1.49
SPTA1P02549 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.71□□□□□ -1.49
SPTA1P02549 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SPTA1P02549 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.71□□□□□ -1.49
SPTA1P02549 FLJ42393-201ENST00000623801 2270 ntBASIC5.71□□□□□ -1.49
SPTA1P02549 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SPTA1P02549 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.71□□□□□ -1.49
SPTA1P02549 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC5.71□□□□□ -1.49
SPTA1P02549 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.71□□□□□ -1.49
SPTA1P02549 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SPTA1P02549 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC5.71□□□□□ -1.49
SPTA1P02549 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC5.71□□□□□ -1.5
SPTA1P02549 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
SPTA1P02549 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.71□□□□□ -1.5
SPTA1P02549 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.71□□□□□ -1.5
SPTA1P02549 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTA1P02549 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SPTA1P02549 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC5.71□□□□□ -1.5
SPTA1P02549 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTA1P02549 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SPTA1P02549 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
SPTA1P02549 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.71□□□□□ -1.5
SPTA1P02549 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.71□□□□□ -1.5
SPTA1P02549 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.71□□□□□ -1.5
SPTA1P02549 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.71□□□□□ -1.5
SPTA1P02549 AC095052.1-201ENST00000509955 863 ntBASIC5.71□□□□□ -1.5
SPTA1P02549 KHDC1P1-201ENST00000511053 508 ntBASIC5.71□□□□□ -1.5
SPTA1P02549 GAPDHP71-201ENST00000511530 1003 ntBASIC5.71□□□□□ -1.5
SPTA1P02549 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTA1P02549 AC092121.1-201ENST00000569452 202 ntBASIC5.71□□□□□ -1.5
SPTA1P02549 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.71□□□□□ -1.5
SPTA1P02549 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.71□□□□□ -1.5
SPTA1P02549 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SPTA1P02549 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.71□□□□□ -1.5
SPTA1P02549 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTA1P02549 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.71□□□□□ -1.5
SPTA1P02549 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SPTA1P02549 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTA1P02549 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.71□□□□□ -1.5
SPTA1P02549 GPBP1-208ENST00000514387 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTA1P02549 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SPTA1P02549 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.7□□□□□ -1.5
SPTA1P02549 AL772161.1-201ENST00000439130 476 ntBASIC5.7□□□□□ -1.5
SPTA1P02549 EEF1B2P6-201ENST00000445713 673 ntBASIC5.7□□□□□ -1.5
SPTA1P02549 AL606490.1-201ENST00000452266 765 ntBASIC5.7□□□□□ -1.5
SPTA1P02549 GYG1P1-201ENST00000460864 698 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms